| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A0930 |
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| Symbol | |
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| ID | 5135487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | - |
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| Start bp | 952179 |
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| End bp | 953465 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640532388 |
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| Product | alanine racemase |
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| Protein accession | YP_001216876 |
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| Protein GI | 147673980 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGCAGC CGCTTCTCAG TCGCAAGAAG AATGTTCCAT CAATGATAAC CACAGGAGAT
ATCATGCATT TTAAAGCCAC GCTGCTTTCT CTCTCTATCG CGGCGACTTT GCCTTCTTTC
TCTCTCTCTG CTGCGCCATT ACACATCGAC ACCGCTTTAC CGGATGCCGC TCAAATTCAG
CAAAGTAATT CTTGGCTGGA GATTAGCTTA GGCCAATTCC AAAGCAACAT TGAACAATTC
AAATCACACA TGAACGCCAA CACCAAAATT TGCGCCATCA TGAAAGCCGA CGCTTACGGT
AACGGTATTC GTGGTTTAAT GCCGACCATT ATCGCGCAAG GCATTCCTTG TGTGGGGGTG
GCAAGTAATG CAGAGGCGCG TGCGGTGCGT GAAAGTGGCT TTAAAGGTGA ACTGATCCGT
GTGCGCTCTG CCAGCCTAAG TGAAATGTCC TCGGCACTCG ATCTCAATAT CGAAGAGCTG
ATTGGTACCC ACCAACAAGC CCTCGATCTG GCGGAGCTTG CCAAACAAAG TGGTAAAACG
CTCAAAGTTC ACATCGCGCT GAATGACGGC GGCATGGGCC GTAACGGCAT TGATATGACC
ACGGAAGCCG GCAAGAAAGA AGCCGTCTCT ATTGCGACTC AACCTTCGTT GAGTGTCGTT
GGCATTATGA CCCACTTCCC GAATTACAAT GCGGACGAAG TGCGCGCAAA ACTGGCTCAA
TTCAAAGAGA GCTCAACTTG GCTAATGCAA CAAGCCAATT TGAAACGTGA AGAGATCACA
CTGCATGTTG CGAACTCTTA CACCGCGCTC AATGTGCCAG AAGCACAACT GGACATGGTT
CGTCCAGGTG GCGTGTTGTT TGGTGATTTG CCAACCAACC CTGAATACCC ATCGATTGTT
TCTTTCAAAA CACGTGTGTC TTCGCTGCAC CATTTGCCAA AGGACTCAAC TGTGGGTTAT
GACAGTACTT TTACTACCAG CCGTGACAGT GTGCTGGCGA ACCTGCCTGT GGGTTATTCT
GATGGTTACC CGCGCAAAAT GGGCAATAAA GCCGAAGTGC TGATCAATGG ACAACGCGCC
AAAGTCGTGG GAGTGACATC GATGAACACC ACTGTGGTTG ATGTGACCGA GATTAAGGGC
GTGCTCCCCG GTCAAGAAGT GGTTCTGTTT GGTCAGCAAC AGAAGCAAAG CATCGCGGTC
AGTGAGATGG AAAACAACGC TGAGCTGATT TTCCCTGAGT TGTATACGCT GTGGGGAACC
AGTAACCCAC GTTTCTACGT GAAATAA
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| Protein sequence | MEQPLLSRKK NVPSMITTGD IMHFKATLLS LSIAATLPSF SLSAAPLHID TALPDAAQIQ
QSNSWLEISL GQFQSNIEQF KSHMNANTKI CAIMKADAYG NGIRGLMPTI IAQGIPCVGV
ASNAEARAVR ESGFKGELIR VRSASLSEMS SALDLNIEEL IGTHQQALDL AELAKQSGKT
LKVHIALNDG GMGRNGIDMT TEAGKKEAVS IATQPSLSVV GIMTHFPNYN ADEVRAKLAQ
FKESSTWLMQ QANLKREEIT LHVANSYTAL NVPEAQLDMV RPGGVLFGDL PTNPEYPSIV
SFKTRVSSLH HLPKDSTVGY DSTFTTSRDS VLANLPVGYS DGYPRKMGNK AEVLINGQRA
KVVGVTSMNT TVVDVTEIKG VLPGQEVVLF GQQQKQSIAV SEMENNAELI FPELYTLWGT
SNPRFYVK
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