Gene VC0395_A0804 details

Gene Information

• Locus tag: VC0395_A0804
• ID: 5136110
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio cholerae O395
• Kingdom: Bacteria
• Replicon accession: NC_009457
• Strand: +
• Start bp: 815517
• End bp: 816176
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640532262
• Product: hypothetical protein
• Protein accession: YP_001216754
• Protein GI: 147673493
• COG category: [S] Function unknown
• COG ID: [COG4340] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGTTAC GTTCTCACCC CAATACCCTA CATATCACTA AACTGAGTCA TTCAGCGATT 
CATCAACTCG CTCCCTCTTT TGCGCATTTA CCGCATACCA ATCATGCGGA CGGGCAGTAT 
CGGCTACGTC GTTACTCCGT GATCCGCTTT ATTGATGGGC AAGTGGTTGA GTTGGACAAG 
CATGACTTTA TGCAGACCGA TCAAATTAAC CATTTTCAAG GCAATGTGGT GCGCCGTTTC 
GAACCGTTAC TCAGTACTAC TTTAAAAAGT GACGGTATGC GTGAGTTGTG CGCGCTGTTT 
ATGGAAGCCA ACACACTTCC CGATGGTCAG GAAATTGAGA TCCATCAGAT GCGGATCGCT 
GCGGTATTCG ATGAAACCTT AGTCGCGCCG GAAGGGGTGC ACCAAGATGG GTTTGATCAT 
ATTGCGATTG TTGGCATTGA TCGCCACAAC ATTGTGGGTG GCGAAATCAT GCTCTATCTC 
AGTAGTCATG AAGCGCCATT TTTCCGTAAA GTATTGGAAA ATGGCGAAGT TGCGATGTTG 
GCCGATAGCC AACTGTGGCA CAACGCTTGC CCGATCCGCA CGGTGGATCA TCAACAAGAA 
GGGCATATGG ATGTTTTTGT TTTGACTGCG AAGGATGGCC GCCATGCGCT TCACTCCTGA 

 

Protein sequence

MMLRSHPNTL HITKLSHSAI HQLAPSFAHL PHTNHADGQY RLRRYSVIRF IDGQVVELDK 
HDFMQTDQIN HFQGNVVRRF EPLLSTTLKS DGMRELCALF MEANTLPDGQ EIEIHQMRIA 
AVFDETLVAP EGVHQDGFDH IAIVGIDRHN IVGGEIMLYL SSHEAPFFRK VLENGEVAML 
ADSQLWHNAC PIRTVDHQQE GHMDVFVLTA KDGRHALHS