| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tter_2749 |
|---|
| Symbol | |
|---|
| ID | 8640778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobaculum terrenum ATCC BAA-798 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013526 |
|---|
| Strand | - |
|---|
| Start bp | 936247 |
|---|
| End bp | 938184 |
|---|
| Gene Length | 1938 bp |
|---|
| Protein Length | 645 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003324458 |
|---|
| Protein GI | 269839765 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.655087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACG CAGACGAAGT CCGAAGTCCC AATGATCCCA GGCTGACCCG CCGGCAGCTC
ATAGAAGCGA TGCTGGCCTC CGGTGGCGTG CTGGCCGCTG GCCCTCTGCT GGCCGCCTGC
GGTGGGGGCA CCCAGGCTAC CCCGACACCC CCAAGTGGTC AAGCTCCTGC AGCGAGCGCC
CCGCCTGCTT CGGCCAGCAG CCCGAGCCCA AGCCCGACCG CCTGCGCTAC CTGTCCCTCC
CCTGGAGCCT CCCCAGGCGT GACTCCCACC GCTGGGGAGA AGCAGGCTGA GGAGGTGCCG
CCCCAGCAGC CACAGAGGGG AGGCACCATT CCTACCCCCA GGGAGCAGAC GGTCGTCGTA
GACCAGGCTC CATTCACCAT CTTCGACAGC TTCAACCCAT TCATTCCCAA CGGTTGGCAG
TACAACGGAG GGGCGCAGCA GATCCTCGTG GAAAACCTCT TCTACTGGTT GCCTACTGGC
GAGATCAAGC CCTGGCTGGG CAAGGAGTGG AAGTACAACT CCGACTACTC CGAGCTGACC
CTTACCCTCA ACCCCAAGGT GAAGTGGAAC GATGGTCAAC CCTTCACATC GGAGGACGTC
AAATACAGCC TGGAGATCCA GCAGGATCCG GCGTTATTCG GTAGCGGCAT CAAGGAGTTT
GATAGCGTTG AGACTCCTGA CGAGCATACA GTGGTGATCA AGCTCACCAA GCCGAATCCT
CGCTACCACC AGCGTTTCAT CTGTGGTATT ATCGGCTCCT TCATCGTGGT GCCCAAGCAT
ATATGGTTCA AGCACAATCC CAAGACCTTC AAGAACAACC CGCCGGTCTT CACTGGCCCC
TACGTTCTGG ACAGGGCTAT ACCATCGCAG CTGATGTTCG TGTGGAAGAA GAACCCCAAC
TACTGGAACA AGGACGAGTT TGATCCCGCT CCTCAGTACG TGGTGTACCG CACAGCGCCC
GTGCCGGACT CGGAGGTCCA GGAGTTCAAG CGGGGCACGG TGGATGTGGC TTCGTTCGAC
TACACGCACG CGATGGCCGT CAAGAACGGC GGCTACCAGA ACATCATCAT TACCACGAAG
TTCAGGGATC CATGCCCGCG CGGCATTCAC GTCAACTGCG ATCCCTCCAA GCCGCTGCTG
TCGGACCCGC GGGCGCGCTG GGCAATCTCC TACCTCATAG ACAGGCAGAA GATAGGTACG
GCCGTGTGGT TCGTGCCCAC CCCGCCCGCG CAGTATCCTT GGGCGGACTA CGAGTCCAAC
AAGAAGTGGT CCAACGACTC TATAGCTTCC AAGTATCAGC TGACCTACGA TCCCAAGAAG
GCGGAGCAGC TGTTCGATGA GCTGGGTGCG AAGAAGGACT CCAGCGGCAG GCGTATGTAC
AAGGGCAAGC AGGTAGAGAT CAACATCATC ACCCCGGTAG CCGTAGGGCA GCCCGAGTAC
GTGATCGGCC AACTGCTCTC GCAGGAGCTA CAGAAGATCG GGATCAAGTC GAGCGTGAGG
GCGCTCTCTG GCAGCGTGTT CAGTGACAAG CAGAGCAAGG GACAGTACGA CCTGCTCTCG
CTATGGATCT GCGGAGAGCT GTTTGATCCC GCCCAGTTCT ACTCCCAGTT CGACAACCGA
CAGTATAAGC CGATCGGCAA GGATGCCTCT TCGGATCAGG TGAGGCTCAA GGACCAGAAG
TTTCAGGAGC TGATCCTCAA GCTCAACAAC GCTAATCCCG ACGATCCGAA GAACAAGCCG
CTATACGACC AGGCGCTGGA GCGGTTCTAC CAGCTCCTGC CGGTCATCCC GATCATCCAG
ACCACTTATC CGAAGGTGTA CAACACCACC TACTGGACAG GCTGGCCCAC CGATGACAAC
GTGTACACGG TGCCCCTGGA GTGGTGGGGC CAGTTCATGT TCGTGATCGG CAACCTGAAG
CCGGCCAAGA GTTCGTAG
|
|---|
| Protein sequence | MSNADEVRSP NDPRLTRRQL IEAMLASGGV LAAGPLLAAC GGGTQATPTP PSGQAPAASA
PPASASSPSP SPTACATCPS PGASPGVTPT AGEKQAEEVP PQQPQRGGTI PTPREQTVVV
DQAPFTIFDS FNPFIPNGWQ YNGGAQQILV ENLFYWLPTG EIKPWLGKEW KYNSDYSELT
LTLNPKVKWN DGQPFTSEDV KYSLEIQQDP ALFGSGIKEF DSVETPDEHT VVIKLTKPNP
RYHQRFICGI IGSFIVVPKH IWFKHNPKTF KNNPPVFTGP YVLDRAIPSQ LMFVWKKNPN
YWNKDEFDPA PQYVVYRTAP VPDSEVQEFK RGTVDVASFD YTHAMAVKNG GYQNIIITTK
FRDPCPRGIH VNCDPSKPLL SDPRARWAIS YLIDRQKIGT AVWFVPTPPA QYPWADYESN
KKWSNDSIAS KYQLTYDPKK AEQLFDELGA KKDSSGRRMY KGKQVEINII TPVAVGQPEY
VIGQLLSQEL QKIGIKSSVR ALSGSVFSDK QSKGQYDLLS LWICGELFDP AQFYSQFDNR
QYKPIGKDAS SDQVRLKDQK FQELILKLNN ANPDDPKNKP LYDQALERFY QLLPVIPIIQ
TTYPKVYNTT YWTGWPTDDN VYTVPLEWWG QFMFVIGNLK PAKSS
|
|---|
| |