Gene Tpet_1274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpet_1274 
Symbol 
ID5171437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga petrophila RKU-1 
KingdomBacteria 
Replicon accessionNC_009486 
Strand
Start bp1286006 
End bp1287211 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content50% 
IMG OID640563799 
Productaspartate kinase 
Protein accessionYP_001244864 
Protein GI148270404 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000164271 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTGG TGGTTCAAAA GTATGGAGGA AGCTCCGTTG CCACACCGGA GAGAATAAAG 
AACGTTGCCC AGAGAATCAA GAAGAAAGTG GACGAAGGGT ACAAAGTCGT GGTCGTTGTC
TCCGCTATGG GAAAGACAAC GGACAACCTC ATAAAACTCG CAAAGGAGAT CTCTCCAAAG
CCGGATTCGA GGGAACTCGA TATGCTCCTT GCAACGGGAG AACAGGTTTC CGCCGCGCTC
CTTTCGATGG CCCTGAAAGA TCTCGGAATA AAGGCCAAAT CTTTGAACGC GTTCCAGGTG
AAAATAAAAA CCACTTCACA TCACACGAGT GCTCGCATCG TGGATATAGA CGACAGTGTG
ATCTGGGAAA ATCTGAAAGA TTACGACGTT CTCGTCGTAA CGGGCTTTCA GGGTGTGAAC
GAACACGGTG ATCTGACCAC GCTTGGCCGG GGCGGTTCGG ATACATCTGC CGTGGCGCTT
GCAGCAAAAC TCAGAGTTCC TTGTGAAATC TACAGCGATG TGGACGGGAT ATACACCTGT
GACCCGCGTG TTCATCCGAG GGCCAAAAAA CTCGCTTACA TCACCTACGA CGAAGCACTC
GAGCTCACCG CTCTCGGTGC GAAGGTTCTT CACTCAAGAT CCGTGGAAAT AGCTAAGAAA
TACGGGATAC CCATTTACTG TGCATCTTCT TTCACCGAAG AGGAGGGAAC CATGGTGGTA
GAAAGACTTC CGGAGTGGCT GGAAGAACCT GTTGTAACAG GAGCAACGAT TTCTCATGGT
CAGATAAAAG TTTCCATATC TTTCCTCCCA AAGGATGTGA AGTACATCAC GGCCATCTTC
GAGGAAGTTG GAAAGAAAGC CCTGAACGTG GACATGATTT CCCTTGTTCC TTCGAACGGC
AAGATTTTCC TCTCCTTCAC AATTCTCGAA GACCACAAAG AAGATCTGGA CGAGGCGCTC
AAAGAGGCTC TCAGAGACGT GGAAGGATGG AAATCCACCT ACGAAGGAGG TTTTGCCAAA
CTCTCCATAG TTGGGGTGGG AATGAGAACG AGCCCGGGTG TGGCCGCCAG GTTCTTTGAA
GCGCTGGAAA GGGCGGGTGT CACACCGGAA CTTGTCACGA CGTCGGAGAT AAAGATCTCC
TGTCTCGTCC CTGAAGAGAA AGCGGAAGAG GCACTGAAAT CGGTGATCGA AGAATTCGAA
CTGTGA
 
Protein sequence
MNVVVQKYGG SSVATPERIK NVAQRIKKKV DEGYKVVVVV SAMGKTTDNL IKLAKEISPK 
PDSRELDMLL ATGEQVSAAL LSMALKDLGI KAKSLNAFQV KIKTTSHHTS ARIVDIDDSV
IWENLKDYDV LVVTGFQGVN EHGDLTTLGR GGSDTSAVAL AAKLRVPCEI YSDVDGIYTC
DPRVHPRAKK LAYITYDEAL ELTALGAKVL HSRSVEIAKK YGIPIYCASS FTEEEGTMVV
ERLPEWLEEP VVTGATISHG QIKVSISFLP KDVKYITAIF EEVGKKALNV DMISLVPSNG
KIFLSFTILE DHKEDLDEAL KEALRDVEGW KSTYEGGFAK LSIVGVGMRT SPGVAARFFE
ALERAGVTPE LVTTSEIKIS CLVPEEKAEE ALKSVIEEFE L