| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpet_1052 |
|---|
| Symbol | |
|---|
| ID | 5171410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga petrophila RKU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009486 |
|---|
| Strand | + |
|---|
| Start bp | 1080188 |
|---|
| End bp | 1080553 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640563570 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001244645 |
|---|
| Protein GI | 148270185 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1302] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGAAG AATACAAGAA CATCGAAATA TCCGACGGAG TGATAAAAGA AATCGCAATC
AGAAGCATCG AAGAGTTTTT GGGGGATGTG AGTTCAAAGG TTATCAAGAA GATCAGGAAG
AGCCTCGATG TTACCAGAAA CCCCGATGAC AGCCTTGTGA TCGAGTTCAA AATCGATGTA
CCCTACGGTG AGTCGATTCC GGAATACGTT TCCAAACTCA CCGAAAAAGT CAAACACGAC
GTCGAAATGA TGACATCCAT GAAAGTGGAA TCCATCAACG TCACGGTGGA GAACGTCTTT
GAGAAAGAAG AGGAGCTGGA AGAAGAACCA GAAGAAATCA AGGAGGATGA AGAAAAGAAA
GAATAA
|
|---|
| Protein sequence | MAEEYKNIEI SDGVIKEIAI RSIEEFLGDV SSKVIKKIRK SLDVTRNPDD SLVIEFKIDV
PYGESIPEYV SKLTEKVKHD VEMMTSMKVE SINVTVENVF EKEEELEEEP EEIKEDEEKK
E
|
|---|
| |