| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_1837 |
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| Symbol | |
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| ID | 4602074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 1779300 |
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| End bp | 1780370 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639774610 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_921235 |
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| Protein GI | 119720740 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.106418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACATAG AAGCTTGGGT GTGCGAAGTC CCGCTTAGGG AGCCCTTAAG GATTTCTGCC
GCGACCTATC ACACCCAGCG CTCCATAGTT CTCCGCTTGA GGGACGGAGA TCTAGAGGGT
TGGGGCGAGG CTTGCCAGTC GAGGAGGGTT CTCGGAGAGA GCTTCGAGGA CGCGCTGGAG
TCTCTGAGAG CGAGCGTCGA CGCAATCAAG AGGGCGGAGT ACGACTCTTT GGAGAAGATT
CACAGGTTCA CCGAGGAGCT CAACGCTACC CCGTCGATAA AGGCCGCTGT TAACATGGCT
CTCCTGGACC TCTACGCGAA GTCGGAGGGC AGGCCTCTGT GGAGGCTTCT CGGGGGCTTC
AGGGAGGAGG TGAGGACGGA CATCACGATA GGGATCATGC GGCCGGAGGA GATGGCGGAG
AGGGCTCTGC GCTACGCTGA GAAGGGGTTC CGGATATTCA AGCTCAAGCT GGGCGAGAAC
CCGGAGGAGG ACGTTCTAAG AGTTAAGGCT GTGCGGGACG TCGTTGGAGA CGCGACGATA
AGAGTGGACG CGAACGAGGG GTGGACGCGC GAGGACGCCG TACGGGTGAT AGAGAGGATA
GCCGACTACG GCGTTGAACT CGTGGAGCAA CCGCTCAGAC ACGACGACAT AGAAGGCCTT
AGGGCCTTGA GGAGGGAAAG CCCGATACCC ATAGCTGTAG ACGAGTCCGT GAAGACGGCG
CGCGACGCGC TGCTGGTAGC CAAGAAGGAG GCGGCCGACA TCATAAACAT CAAGCTGATG
AAAAGCAGGG GGATTACGGG CGCAATCAGG ATAATCATGG TAAGCGAGGC GGCCGGGCTG
AAGAACATGG TCGGATGCTT CTCCGAGTCT AGGCTTGGCA TCACGGCTAC CGCTTACCTC
GCCCAGGCAT TCTCCAACGT GCTGTTCTAC GACTTGGACT GCGACATACT GAGCGCCGAC
CCCGTGTTCA CGGGAGGCTC TGAGCCTATT GGTGACAGAA GAAGAGCTTC CCCGAAGCCT
GGGCTGGGAA TCTCGCCGAG TAACTTCAAC GTATTGAAGA AGATCCTCTA G
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| Protein sequence | MDIEAWVCEV PLREPLRISA ATYHTQRSIV LRLRDGDLEG WGEACQSRRV LGESFEDALE
SLRASVDAIK RAEYDSLEKI HRFTEELNAT PSIKAAVNMA LLDLYAKSEG RPLWRLLGGF
REEVRTDITI GIMRPEEMAE RALRYAEKGF RIFKLKLGEN PEEDVLRVKA VRDVVGDATI
RVDANEGWTR EDAVRVIERI ADYGVELVEQ PLRHDDIEGL RALRRESPIP IAVDESVKTA
RDALLVAKKE AADIINIKLM KSRGITGAIR IIMVSEAAGL KNMVGCFSES RLGITATAYL
AQAFSNVLFY DLDCDILSAD PVFTGGSEPI GDRRRASPKP GLGISPSNFN VLKKIL
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