Gene Tpen_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_1215 
Symbol 
ID4601627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp1153055 
End bp1153882 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content61% 
IMG OID639773991 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_920616 
Protein GI119720121 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAGAG TGCTCGTCGT AGGTCTAGGA GAGGTTGGCT CCGCTGTCTA CGAGGTTCTC 
AGGGACTCCG GGAGGATGGA GGTCTACGGC TACGACCTGG ACCCGTCGAA GACCGTGCAC
AGGCTGGAAG ACGTGCCGGC GCCGCTGGAC TACCTGCACG TAGCCATACC GTTCACTCCG
CGCTTCGTCG ACGCCGTCAA GTCCTACGCG GAGAAGCTGA AGCCGAGGGC TGTCTTCGTG
CACTCCACGG TCGCGCCGGG CACGACGAGG CTCCTACACG GCGAGGCAAG GCTACCCGTC
GCCTACACCC CCGTCAGGGG GAAGCACCCA AACCTGAAGA AGCACCTGCT CTTCTGGCCG
AAGTGGGTCA GTGCGGTCCC CGAGGGCTTC ACCGAAGAGG CGAAGAGGCA CTTGGAGGCG
GCAGGCTTCA AGGTGAAGCT CGCCAGTAGC CCCGAGTCGC TCGAGATAGC GAAGCTCTGG
GAGACCGTGT ATAGAGCCGT GATGATAGCC TCGTGGCAGG AGCTACACAG GGTCGCGGCG
AGGTACGGCG CCGACATAAG GGTCGTAGCC GAATTCATAG CGGAGGTACA CGAGGTGCTG
GGAGACAGGC CCGTCTACTT CCCCGACTAC ATAGGTGGTC ACTGCCTGAT ACCCAACACC
GAGATACTGA ACAAAGCCTA CCCCTCGAAG CTATTCGAGT TCGTCCTGGA GTCCAACGAG
AAGCGCAGAA AGGAGGTGGA GGACCCGCGC GTCAAGCGGG AAATAGAGGA CACGAAGAAA
CTCTTCCTCA AGCTAACCCG GGCAGACTAC TACGGCGGCA ACATATAG
 
Protein sequence
MERVLVVGLG EVGSAVYEVL RDSGRMEVYG YDLDPSKTVH RLEDVPAPLD YLHVAIPFTP 
RFVDAVKSYA EKLKPRAVFV HSTVAPGTTR LLHGEARLPV AYTPVRGKHP NLKKHLLFWP
KWVSAVPEGF TEEAKRHLEA AGFKVKLASS PESLEIAKLW ETVYRAVMIA SWQELHRVAA
RYGADIRVVA EFIAEVHEVL GDRPVYFPDY IGGHCLIPNT EILNKAYPSK LFEFVLESNE
KRRKEVEDPR VKREIEDTKK LFLKLTRADY YGGNI