Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_1198 |
Symbol | |
ID | 4600390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 1136899 |
End bp | 1137543 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639773974 |
Product | TrkA domain-containing protein |
Protein accession | YP_920599 |
Protein GI | 119720104 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGTCG CGGTGATAGG CGGGGGAAGG GTCGGCTACT CGATAGCGGA GTTCTTCTCC AAGAGGGGCG ACAGGGTTGT CGTCGTGGAG AAAAACGAGA AGGTGTGCGG CGAGCTTGCC GGGAGCCTCG ACGTCACCGT TTACTGCGGT GACGCCAGGT CTATCAGGCT ACTCGAGGAG GCCGGGGTAA ACAAGGCCGA CGTCCTCTTC GCGGTGTCGG GTAGCGACTC CCTAAACATA CGCGTAGCGT CTGTTGCCAA GAAGAGGTTC GGGGTACCGA GGGTTGTCGT CAGGGTGAAC CACGCCGAGA ACAAGGAGAA GGCGGCCCAG TCGGGGGCAG ACGAGGTCAT ATGCCTGGAC GAGGTGGCAG AGCTCTTCGT AAGGGCTGTG ACAGAGGTAG ACTACAGGGT TCTCTTCAAG CATGGGGGTT TCGCGGTCGT AGAGATCAGA GTGTTGCCGG ACTCCCCGGC GATAGGCAAG CCCCTGCGGG AGCTCGTCGA GAAGGGCTTG AAAGTGGTGG CGGTCGTGCG GGACGGGAGC CTCGTGGAGG CGGGGGAAGA CCTCGTGTTG GAAGCCGACG ATAGGCTCGT GCTCGCCGGG AGAGAGGAAG CAATAAATGA GACTAGGCAG GATATTCTTG GATAA
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Protein sequence | MFVAVIGGGR VGYSIAEFFS KRGDRVVVVE KNEKVCGELA GSLDVTVYCG DARSIRLLEE AGVNKADVLF AVSGSDSLNI RVASVAKKRF GVPRVVVRVN HAENKEKAAQ SGADEVICLD EVAELFVRAV TEVDYRVLFK HGGFAVVEIR VLPDSPAIGK PLRELVEKGL KVVAVVRDGS LVEAGEDLVL EADDRLVLAG REEAINETRQ DILG
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