| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0840 |
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| Symbol | |
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| ID | 4601549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 790347 |
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| End bp | 791228 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639773617 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_920244 |
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| Protein GI | 119719749 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0605901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGG AGCTGCTTGA CGTCTACGTA CCCATCGCGA GTGGACTAGC ATTCGGGTAC
TTGAGCAGGC CCGGTGAAGG CGAGCTGAGG CTATTCGCGA GAACCGTGCT CTACGTCTTC
CTCACACCGC TCTTATTCAC GTCTACCTAC CAGAGGTTAT CCTCGTCTCC GGCCTCCGCC
CCGCTCGCAC TTACCGCTTT AAGCGCTTCG CTCGTCGTCC TGACGTTCGC TATCGCTACT
AAGCTTCACG GAGACCCAGA GCTCGTGCTG GCCTCTATGT ACGCAAACGC CGGGTACATA
CCACTGGGCA TAGCACAGTC ATACTGGGGG AGCTACGGCG CATCGGCTGT GGGCTTCTAC
ATCCTCGGGA ACAACTTCGC GTCTAACATC CTAGCACCGC TCGCGCTCGG CGGCGAAAGC
GGGAGGCTCA GCCCGCGGAA GGTGCTCGCC TTTCCCCCCG TGTACGCCAT CCTAGCCGCC
TCAGCGCTGG CGCTAGCCGG CGTAAAGCTC CCCGAGCTTT TGCTAAGCCC GCTAGCCACT
CTCGGAGGCG TCGCGCCCAC AGTGGCGCTC GTGCAGCTCG GGATGGAGGT AGGGGCAAGC
GTCGACGCGA ACATCGTCGA CGGGCTTAAA GCCTACTTCA CGCGTCTCTC GGTCTCAGTA
CCGCTAACCC TGCTTTTCGT GGAGGCAGGT CTAGCGACGG GCATCGACGC CAAAATCGCC
ATCGTAGAGT CTGTGATGCC CAGCGCTGTG TCCTGCGTCG TCATATCCCG CGAGCTGAAA
CTGGATTCGA GGAGAGTAGC GGGCGTTGTA TTCACGTCTA CGCTCGTCTC CACGCTCCTC
GCGCTACCAG TTACCCTGTG GCTTCTGAGC TTCACGCGTT AA
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| Protein sequence | MIKELLDVYV PIASGLAFGY LSRPGEGELR LFARTVLYVF LTPLLFTSTY QRLSSSPASA
PLALTALSAS LVVLTFAIAT KLHGDPELVL ASMYANAGYI PLGIAQSYWG SYGASAVGFY
ILGNNFASNI LAPLALGGES GRLSPRKVLA FPPVYAILAA SALALAGVKL PELLLSPLAT
LGGVAPTVAL VQLGMEVGAS VDANIVDGLK AYFTRLSVSV PLTLLFVEAG LATGIDAKIA
IVESVMPSAV SCVVISRELK LDSRRVAGVV FTSTLVSTLL ALPVTLWLLS FTR
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