Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0524 |
Symbol | |
ID | 4601341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 475653 |
End bp | 476747 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639773293 |
Product | putative circadian clock protein, KaiC |
Protein accession | YP_919933 |
Protein GI | 119719438 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGTTTG ACTTGGCAGG CATGGATAGG GTTGCTAGGT CTTCGTGCAT AGGATGCCCT CTCTACATAA AGTCCAGGCA GTACTGTTTA AAGCTTAAAA CGAGAGTCGC GGACCCCTAC AGCCCGCCCT GCAGGGTAGC CCAGCCAGCA GAGGCTGTCC AGGTGTCTCA GGCTACTGTC GTCGAGGCGA CGCAGACAGC AGTGCAGTAC CCGCAACCGG TTGCCAGCGT CGCTGGTAAT GCTTATCCCG TTGCCCAGGA GCCTTATCCT GTCGAGGAAA TACCCTATAC GGATGAGGCA TATGAGGTCA TGTCGACTAA TCAGGCTTTG CTGTCGAAGA GAGCACTTTA CGCGCCTACC GGCATACCTG GCCTTGACGA GATCCTCGCA GGAGGTTTTC TACGCGGTAA GACGTACTTG GTAGCTGGGG AGGCGGGTTG CGGTAAAACG ATATTCTCTA TTCAGTTCCT GATTAATGGA GCGTTAAACG GCGAGCCCGG GCTCTATATA GCTATAGACG AGCCTACGAA CCAGTTGTTG CGCGGGTTGA AGCTGTTCGG CTGGGACCTA GGCGACTTAA TCTCGGCTAG GAAGCTGATG TTCCTGGACA TGAGGACGCA CTTCAGCAAG ATCTACATGA GGGACGAGAG AAAGCACATC GAGCCCAGGT ATATTATCGA GCAGATACTT AACGCCGCCA AGAAAATAAA CGCTAAAAGG CTAGTCATAG ATCCCATTGC ACCGCTAGTC TACGGCGGCA AAGAAGAGGA CGTGCTCTAC GCCAGGGAGT TCCTCAGGGA GATGGTCTTC GCTATCGAAA AGACTGGGGA GCTAACAACC ATAATGACGA GCGAGATACC CACTGGCAGC ACCAAGCTCA GCAGATTCGG CGTGGAGGAG TTCCTGGCGT CGGGAATAAT AGTTCTCGGA ATAGAGGAGA TATACGGTAA CGTCGAAAGG GTCATGTACA TAAGGAAGGC TAGATGGGCC CCGGTAAAGC CCAGCAAGTA TATCTTCGAC ATTGTATCGG GGAAGGGTAT AGTTATCAGG GAGCCGCTCA GCGACTACCT TGCACGCTTA AGGAGAGGGG CTTAG
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Protein sequence | MGFDLAGMDR VARSSCIGCP LYIKSRQYCL KLKTRVADPY SPPCRVAQPA EAVQVSQATV VEATQTAVQY PQPVASVAGN AYPVAQEPYP VEEIPYTDEA YEVMSTNQAL LSKRALYAPT GIPGLDEILA GGFLRGKTYL VAGEAGCGKT IFSIQFLING ALNGEPGLYI AIDEPTNQLL RGLKLFGWDL GDLISARKLM FLDMRTHFSK IYMRDERKHI EPRYIIEQIL NAAKKINAKR LVIDPIAPLV YGGKEEDVLY AREFLREMVF AIEKTGELTT IMTSEIPTGS TKLSRFGVEE FLASGIIVLG IEEIYGNVER VMYIRKARWA PVKPSKYIFD IVSGKGIVIR EPLSDYLARL RRGA
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