Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0378 |
Symbol | |
ID | 4602146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | + |
Start bp | 343292 |
End bp | 344185 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639773139 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_919790 |
Protein GI | 119719295 |
COG category | [K] Transcription |
COG ID | [COG1395] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.519248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAACA AAGTGGTTCG GTTTAAGTCC TCCGAGTACT GTGTTGACGA GGTTACGGTG GCGTCTAAGT ACATCTTGCT TGAAAAGAGA GTGAAAGACG CTTACCAAGT TACACAGTAC CTTGCGGAGA ATCTTCGAGT TTTTAGCGAG TTCTTAGAGG GGCTCCCCCT CATAATCGCC GAGTCGTACA AGGGTGAGAA GATAGAGGAG GACGTAGTAT ACTCTAGGCA CAACGTCCCC GTGGTTAGTA GCTCTACGGC AAATAGCCTC CTTAGAGGAG AAAGGAAGTA CTTAGTCTAC GTTAGCAAAG GCGGAGTATT CGTGAAACTT AACGGTAAAG AACTTAGAAA GGCGCGGGAA AGGATGGGGC TCTCGAGGGG GGCCCTTGCG AGAGAGGTTG GTGTCTCGGC GAGAACCATA GCGTACTACG AGGAGGGACT CAGCGACGCG ACACTAGAGA TAGCCGCGAA GCTCGAAGAG ATACTCGGCA GCGAGATCTT TGAAGCCATA AGCGTGGATT CGCTGAGGGA GCTGACGAAG TCGGGTAGGC CTTCCGTTGG CAGCCCAGCC AAGAGGGGGA GAAACGTTGA GTGGCTTATC TCCACGCTGA GGGACTTTGT AGGGGAAAGG TACTTTTTCG ATAAAGCACC CCTAGACGCT GGGTTCAAAG TATCGCTGAA AACTACTTCA AAGTTTGCAA TCAAGGCCGG GATCTCAAAA GAGGAGGAAG TTCAGGACGT GAAGGAGCTT TCCGAGGCGA CGGAGACCCC TGTAGTTATA CTGAACAACA AGGAGGAGAT TTTGAGCGAG AAAGTGATTG TGGTTGATAA GAGGAGGCCT GAGAAGCTTA GGGACTACCT GTCTAGGATA ATGGAGAACA CGCGTGACGA ATAA
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Protein sequence | MTNKVVRFKS SEYCVDEVTV ASKYILLEKR VKDAYQVTQY LAENLRVFSE FLEGLPLIIA ESYKGEKIEE DVVYSRHNVP VVSSSTANSL LRGERKYLVY VSKGGVFVKL NGKELRKARE RMGLSRGALA REVGVSARTI AYYEEGLSDA TLEIAAKLEE ILGSEIFEAI SVDSLRELTK SGRPSVGSPA KRGRNVEWLI STLRDFVGER YFFDKAPLDA GFKVSLKTTS KFAIKAGISK EEEVQDVKEL SEATETPVVI LNNKEEILSE KVIVVDKRRP EKLRDYLSRI MENTRDE
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