Gene Tpen_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpen_0198 
Symbol 
ID4600807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermofilum pendens Hrk 5 
KingdomArchaea 
Replicon accessionNC_008698 
Strand
Start bp177850 
End bp178623 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content57% 
IMG OID639772952 
Producthypothetical protein 
Protein accessionYP_919611 
Protein GI119719116 
COG category[R] General function prediction only 
COG ID[COG2047] Uncharacterized protein (ATP-grasp superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGTGT TGAGCCTCGA CCAGTACAGG CTGATCCTGG CGGAGGAGTT GAAGCTTAGA 
GACGGGGTGC TAGTTCAGGG GTTACCGGGG ATAGGGCTCG TCGGGAAAAT AGCTGTAGAC
TACATAGTCT CCACGCTAAA CCTTAGGAAA GTAGCGGAGC TTATAGGCCC GGGGATCATC
CTCCCTGTTG GCAACGTGGG GGTCTACGTG ACGAATGAAG GGGCCTTGCA GATCCCGTCC
TACAAGTTCT ACCTGCTCAA CGGGGGGTCG AGGGACATCC TGTTCGTTAC GAGTGAAGCT
CAGCCAGCGC TTTGGGCCCA GTACGAAGTC GCCGAGAAAG TTTTAGACTT CTTCGTATCC
ATAGGGGGGA GGGAGGTTAT AGGGGCATGC GGCACGACAG CCGAGGAAAG TGAACACGTA
GGGGTGTACT ACGCTTACGC CTCGGAGGAC TGCGCCAAGA AGCTGGAAGC GCTCGGAGCA
AAGCGTAGCA CGGGGGGTAC GATAACGGGG GCCTGCGGGC TTCTACCGGC GCTAGCTGCG
CTTAGGGGTT TGAAGGCCTA CGTTCTCATG GGTAGCACTC AAACCCCCGA GCCTAACTTC
GTGGCCGCCC GGGAGCTGAT AAGAGTTCTC TCGAAACTAC TCGAGTTTGA GGTGAGCCTC
GAGGATCTCG AGAAAACGAT CGAGCAGATA CGCAGACGGG AGGAAGAGAT GGAGAAGGTC
CTGGAAACGG CCCGCCAGAA GGAGGGAGAA TCTCTTCCAA GCTGGTACGT GTAG
 
Protein sequence
MRVLSLDQYR LILAEELKLR DGVLVQGLPG IGLVGKIAVD YIVSTLNLRK VAELIGPGII 
LPVGNVGVYV TNEGALQIPS YKFYLLNGGS RDILFVTSEA QPALWAQYEV AEKVLDFFVS
IGGREVIGAC GTTAEESEHV GVYYAYASED CAKKLEALGA KRSTGGTITG ACGLLPALAA
LRGLKAYVLM GSTQTPEPNF VAARELIRVL SKLLEFEVSL EDLEKTIEQI RRREEEMEKV
LETARQKEGE SLPSWYV