Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3972 |
Symbol | |
ID | 9158154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 4090368 |
End bp | 4091285 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | beta-lactamase |
Protein accession | YP_003648882 |
Protein GI | 296141639 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0506092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCCTG AGCCGGTGAC CGGGGCCGAT GCCACGGCGG CCGCGATCGC GGAGGTGTTC GCCGACGCCG GTTGCAACGG CTGGCTGCAC GCCCGGGTGG TGGGCGCCGA CGCGGAGCTG TCCGTGAGTG GCCACGAACC GGTGGTGCCG GCGTCGGTGT ACAAGATCGT GCTGCTGGTG GCGGCCTGCC GCGCCTTCGA TTCCGGCCGG CTCGATCCGC GGCAGCGGGT CACTGTCGAC CCACGGACGG CGACTCCCGG CCCGACCGGC ATCGCGACCT TCGACGATCC GGTGCAGCTG AGTGTGCGCG ACCTGGCGCG GTCGATGATC GCGGTCTCCG ATAACGCGGC CGCCGGGACG CTGCTCTCGC TGGTGGGACT CGACGAGGTG CAGCGCACCG CGCGTGAACT GGGTTTGCGT CGCACCGTGA TCGCCGGTGG CGATGCCGAG ATGCACACGG CGCTGATGAC GGAGACGGGC ACGCACACCG TCGCCGAGGC CTTCGCTGCA CTGGCCGACG ACGATCTGTC CCGTCCGGTG CGCGCGTACG ACCCCAGCTT CGGCAGCGCC ACCACCGCCG CCGATGCGAC CGCACTGCTG GCGGCGATTT GGTCGGACAC GGCCGCCTCG CCGCAGGGCT GCGCATTCGC GCGGTCAGCG CTGGCAGGAC AGGTATTCCG GCACCGGATC GCGTCCGGCT TCGGTCCCGG CGCCGAGATC GCCGGCAAGA CCGGAACGCT CGGGGCGCTG CGCAACGAAG CGGCGGTGGT CAGCTACCCG GGCGAGCATC CCGTGGCCGT CGCGGTGTTC ACCCACGCGG CCCGCAACGA TCCGGCTCTG CCCCGGGTCG ACGCCGCGAT CGGGCGGGTC GCGCTCCGCG CGGTGAGTGC CCTTCGCACA CCCCTCGACA TGCGGTGA
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Protein sequence | MAPEPVTGAD ATAAAIAEVF ADAGCNGWLH ARVVGADAEL SVSGHEPVVP ASVYKIVLLV AACRAFDSGR LDPRQRVTVD PRTATPGPTG IATFDDPVQL SVRDLARSMI AVSDNAAAGT LLSLVGLDEV QRTARELGLR RTVIAGGDAE MHTALMTETG THTVAEAFAA LADDDLSRPV RAYDPSFGSA TTAADATALL AAIWSDTAAS PQGCAFARSA LAGQVFRHRI ASGFGPGAEI AGKTGTLGAL RNEAAVVSYP GEHPVAVAVF THAARNDPAL PRVDAAIGRV ALRAVSALRT PLDMR
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