| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3971 |
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| Symbol | |
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| ID | 9158153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 4089547 |
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| End bp | 4090386 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003648881 |
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| Protein GI | 296141638 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0785973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCTGA TCCGGCACCT GCGGTTCTTC GTCGCGGTCG CCGAGGAGCA GCATTTCGGG
CGCGCAGCCG ATCGGCTGGG CATCACGCAG CCACCCGTCT CCGCCGGTCT GCGCCGCCTC
GAGGAGGCGC TGGGCGTCAC GCTCATCGAT CGCAGCCGAC GGGGCGCCGA TCTCACACCC
GCGGCGCGTG AGTTGCTCCC GCGCGCGCGG GTCATGGTCG GCGACGCGGA CCGCTTCGTC
GCCGAGGCGG CGCGGCTCGG CGCCGGGACC GGGCAGCGCC GAGTGGCCCT GTGCGATGCG
CTCGGCGGCG CGAGCGCCAC AGCGTGCGCC GCCGGATTGC GCGGCGGCGA CGATCCGCTG
ACGCTGTCGG CCGGTCCCTC ACCGCAGCTG GCACGGGCGG TGGCGGAAGA CCTGTTGGAC
GCCGCCGTCG TCGAGCACCC CGTACTGTCC GACGGTGCGC CGTCGGGCCC CGTCATCGCC
CTGCCGCGAG ACTTCCTGGT ACCGGCTGAC TTCCGCTCTC CTCGCCTGAG AGAGCTGTCG
GCATTGCAGC TGGCGATGCC GCCTCGCTCG ACGAATCCTC CGGCGGCCGA TCTGCTCCTG
GACCGGCTCA CGGCGCGGGG CATCACGTCG ACGCCGCGTA CCACCGAGAC CGAGGCGGCC
ACATACGCCG CGGTCGCGGC CGGGTTGGCT TTCGCGCTTG TCGCTTCGGG CGGACCGGTG
CCACCGGGCA CCGCACGCCG CGCGGCGCCG GATTTCCCGC TGCGGGTGCG GGTGCTGGGC
CGGCGTGAGC ATCCCGATGT CGCGCGGCTG GAGTCGACGC TATGGCGCCT GAGCCGGTGA
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| Protein sequence | MDLIRHLRFF VAVAEEQHFG RAADRLGITQ PPVSAGLRRL EEALGVTLID RSRRGADLTP
AARELLPRAR VMVGDADRFV AEAARLGAGT GQRRVALCDA LGGASATACA AGLRGGDDPL
TLSAGPSPQL ARAVAEDLLD AAVVEHPVLS DGAPSGPVIA LPRDFLVPAD FRSPRLRELS
ALQLAMPPRS TNPPAADLLL DRLTARGITS TPRTTETEAA TYAAVAAGLA FALVASGGPV
PPGTARRAAP DFPLRVRVLG RREHPDVARL ESTLWRLSR
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