Gene Tpau_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3500 
Symbol 
ID9157675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3611252 
End bp3611812 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003648418 
Protein GI296141175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.711575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCGGC CCGTGGATCA CGCGCGTCGC GCACAGCTGC TCGACGCCGC TGTCGATGTG 
GTTGTCGCGC ACGGTCTCGC GGACCTTTCG TTGCGCCCGC TCGCCGCCTC GCTCGGGGTA 
TCCACCAGCA CACTCACCCA CCATTTCGGT TCGAAGGAAC AGCTGGTGCA GGCAGTACTC 
GACCGGATCC GGAATCGCTT GAGCCTGGAC GTGATCGACG GTGAGCCCGG ACTCCCCGCC 
GCATTCCGGC GGGTGTGGCG GTACGGATCG GCCCCGGAGA ACGAGGCCTA CTTCCGCACC 
TTCTACGCCG CCTATGGACA GGCATTGCAG CACCCGGACC GATTCGACGA CTTCCTGGGC 
CACGTGGTCG ATGACTGGCG GATCGCCCTC GCCGCCGCGG CCCGTCGTGC GCCCGGCGAC 
ACCGCGATCA CCTTGGCGAT CGCCACCTTC CGCGGCCTTC TCCTGGACTT GCTGACCACC 
GGCGACCGGG AACGCGTGTG TGAGGCCGCC GATCGCTACG CCGCGACACT GCCGCTGTGC 
GAGACTGACC GGCGTGTCTG A
 
Protein sequence
MGRPVDHARR AQLLDAAVDV VVAHGLADLS LRPLAASLGV STSTLTHHFG SKEQLVQAVL 
DRIRNRLSLD VIDGEPGLPA AFRRVWRYGS APENEAYFRT FYAAYGQALQ HPDRFDDFLG 
HVVDDWRIAL AAAARRAPGD TAITLAIATF RGLLLDLLTT GDRERVCEAA DRYAATLPLC 
ETDRRV