Gene Tpau_2405 details

Gene Information

• Locus tag: Tpau_2405
• ID: 9156565
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 2500634
• End bp: 2501302
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 70%
• Product: LmbE family protein
• Protein accession: YP_003647350
• Protein GI: 296140107

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.140634
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTGCCG TGAGCGAGCC GCAGATCTTC CCCGAGGACT GGAACACGGC GCTGGTGCTG 
GTAGCGCATC CGGACGATCC GGAGTACGGG ATGGCGGCGG CCGTGGCTCG GTGGACGGCG 
CAGGGCAAAG CGGTGGCGTA CGGGCTCGCG ACGTCGGGTG AGGCGGGGAT CGAAGGCATG 
TCGCCCACGA CCGCCGGGCC GGTACGCGAG GAGGAACAGC GACGGTCCGC CGCGGTCGTC 
GGGGTGGACG ACGTGCGGTT CTGGGGCTTT CCCGATTCGA ACGTCCGCAA CACCCCGGAG 
CTGCGGGCTG CGATCGCCGC GTCGATCTCC GAGCACGCGC CCGATCTGGT GTTCACCATC 
TGGGGCGGCG CCGAATGGGC ACCCGGCGCA CCGAATCAGA GCGACCACAT GGAGTTCACC 
GCCGCGGTCG CCGAAGCGGC CCGGGCGGCC GGCGTCACGG CGTATCAGAG TTCGCCCGAG 
CCCACCCTGG TGGTGGATGT GACCGGGTAC ACCGAGCGGG CGGTCGAGTC GCTCGCGGAG 
CACAGGCAGT ACTTGTCTGT GCTCGATCCG TCGACGCCGG TGATCGAGCA GGCTCGTGAA 
CAGGTGAAGT GGGCGTGCCT CCCGCGAGGG GAGTTCGCGC ACGCCGTCGG GTTCTCCGCG 
CTGCCGTAG 

 

Protein sequence

MSAVSEPQIF PEDWNTALVL VAHPDDPEYG MAAAVARWTA QGKAVAYGLA TSGEAGIEGM 
SPTTAGPVRE EEQRRSAAVV GVDDVRFWGF PDSNVRNTPE LRAAIAASIS EHAPDLVFTI 
WGGAEWAPGA PNQSDHMEFT AAVAEAARAA GVTAYQSSPE PTLVVDVTGY TERAVESLAE 
HRQYLSVLDP STPVIEQARE QVKWACLPRG EFAHAVGFSA LP