Gene Tpau_2330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2330 
Symbol 
ID9156486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp2424692 
End bp2425798 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003647276 
Protein GI296140033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.489785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTACGC ATAGATCAGG ATCCGGTTCT CGCGGCCTCG CACGCTGGGT GATCGCGGCG 
ATCGCGGCGG TCCTGGTGGT GATCGCGGTG GCCGGGGCGA TGCTCTGGTT GCTGGGCCGT
TCCGAGCAGG AGGGCCGCGA TGCCGCCGCG ACCTGCGTCG AGGGCGATCT CCAGCTGAAG
GTGGCCGCCG CGCCCGCGCT GGTCGAATCC CTGCGCCGCG TTGCCGACGG ATTCAACTCG
TCGGGAACGG TCTCGAACGA CTACTGCCCG CGGGCGGAGG TCACGGGTGT CGACTCCCCC
GTCGCACTGT CCGCGCTGGC GGGGACGTGG GATCCGAAAC TCGGTCCGGC ACCGGCGGTG
TGGATCCCGG AGAGCAGCAT CTGGACGGCA CGCCTGGCCG CCGCGAAGCC GGCCGAACTG
TCGGGGCAGC CCACGTCCAT CGCATCATCG CCGGGTGTCC TGGCGGTGCG TGGTTCAGCA
CGGCAGGCCT TCGACGGAGT CCGCTGGGTC GACGTGCCCG CACGCCAAGC CGATCTCGGG
ATCTCGTTGC CCACCGCCGG TTCCGGCGCC GACGGCACCT ATCTGGCGGC CCAGTCCGTG
GCTGCCGCTG TTGCCCGCAC GGGTGGCGCC GCGATCGACG AGGAGGCCGC GCGCGGCCCG
CTGGTGACCG GCACGTTGAA CCGCTGGGCG AGCGCGGCAC CGAAGACGGC GAACGCCACC
GCGGCGCTGG AGGGCCTGAT GGTGCCGTCG GATTCGCTGC GCGCCGTCCC GGTCACCGAG
CAGCAGTTGT ACGCCTTCGC CCGCGGTCGG GGCGAGACCG CTCCCGTGGC GGTGTATCCG
GCGGGGCCGA CCGCCGCAGC CACCTATCCG GCCGCCGTGC TCGATCGCGA GGGCGTCACG
GAGGCGCAGC GTCGCGCTGC GTCCGACTTC GTCGCCTACA TCGGCAAGGG CGAGAACGCG
AAGCCGCTCG CGGAGGCCGG TTTCCGGGTC GCGGGTCAAC CCACGCCGGA CAAGACCTCG
TCGGTGTCCT TCGGCACCGT CCAGCCACTC GCACCCGCGG CGAACCCAGC GGTCATGGCG
ATCGCCGACG CGATCACCCC CAAGTGA
 
Protein sequence
MGTHRSGSGS RGLARWVIAA IAAVLVVIAV AGAMLWLLGR SEQEGRDAAA TCVEGDLQLK 
VAAAPALVES LRRVADGFNS SGTVSNDYCP RAEVTGVDSP VALSALAGTW DPKLGPAPAV
WIPESSIWTA RLAAAKPAEL SGQPTSIASS PGVLAVRGSA RQAFDGVRWV DVPARQADLG
ISLPTAGSGA DGTYLAAQSV AAAVARTGGA AIDEEAARGP LVTGTLNRWA SAAPKTANAT
AALEGLMVPS DSLRAVPVTE QQLYAFARGR GETAPVAVYP AGPTAAATYP AAVLDREGVT
EAQRRAASDF VAYIGKGENA KPLAEAGFRV AGQPTPDKTS SVSFGTVQPL APAANPAVMA
IADAITPK