| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2296 |
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| Symbol | |
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| ID | 9156452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 2389673 |
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| End bp | 2392984 |
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| Gene Length | 3312 bp |
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| Protein Length | 1103 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | exodeoxyribonuclease V, gamma subunit |
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| Protein accession | YP_003647242 |
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| Protein GI | 296139999 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.566051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCACCG TGCACCGCAG CGAGCGGGGC GACGTCCTCG TCGACGCCCT CGCCGAGGTC
CTCGCCACGC CCGGCGCGGA CCCGTTCGCC GCAGAAGTGG TCGCGGTGCC CGCCCGCGGA
GTGGAACGGT GGATCACACA GAGTCTGGCC GCGCGTCTGG GCATCGCCGC CAACATCGAC
TTCCCCACGC CGGATGCGCT CGTCGCCGCG GCGGTGGCCG CAGCCTCGGG TATCGCGCTC
GACGACGATC CGTGGCGCGG TGAGCGCCTG GTCTGGCTGG TGCTGGCGGC GGTGGACGAA
CTCGCCTTCG AACCCGGTGG TGAGGTCCTC GCCCGGCACC TCGGTGTCAC CCGCCCGGGT
GGCTGGGCCG AGCAGCCCGG GCACCGGCCG CGGCGCCGCT ATCCCACCGC CGACATGCTG
GCCGGACTAC TCCGGTCCTA TGGTGCGAAC CGCCCGGGCA TGCTGGTCGA CTGGACGGCG
GGGCGGGAGA CCGACGGAAC CGGGGGTGCG TTGCCCGCTG ATCTGCGGTG GCAGGCAGAG
CTGTTCCGGC GTGTGCGCGA CCTGGCCGGT GTCCCCAGCC CCGCCGAGCG GCTCGACGCG
GCCTGCGCCC GGCTCCGCGA CGAACCCGCC CTGGTGGCGC TGCCATCGCG GTTCTCGGTC
TACGGACCCA CCCGTCTTCC GGCGGATCAG GCCACGGTGT TCGCGGCGCT CGCCGCCCAC
CGGGACGTGC ACCTGTGGTT GCCGCATCCC AGTCCCGCAT TGTGGGCGGC ATCCAGGGAA
AGACCGAGCG CAGCGGTGGG GGCCGCCGTT CCACGGGTGC CCGGTGCGAC GGCGACCAAC
CCCCTCCTCG CGAGCCTCGG GCGCGAGGCG AGCGAGCTTC AGGAGCGGGT GAGTCCGGTG
GCCGGCGCCG ACGTCCATCA CCCGGCGCCC GCGCGTCCCG GCACGCTACT GGGACGGCTG
CAGGCGGCCG TCGCCGGGGA CGCCCCGCTC CCGGCGGGTA CCGCCGAGCC AGACGGCACC
GTCGAGTTCC ACGCCTGTCA TGGCGCGGCG CGGATGATCG AGGTACTGCG TGAGCGCCTG
GTGCGGCTGT TCGAGGACGA TCCCACATTA CAGCCGCGCG AGGTATTGGT GACCTGTCCG
GACATCGAAA GCTATGCGCC GCTGATTCGT TCGGCATTCG GACAGGCCGT CTCCGGTGCC
GGGGCGGTCG AATCCGGCGA TCCGGTCCAT CCGGGGCAGC GGCTGCGGGT GCGGCTGGCG
GACCGTTCAC TGCGGTTCGC CAATCCACTT CTCGACGCGC TGGTCACGGT GTTGGAGCTG
GCCGACGGCC GCGCCACTGT GGCGCAGGTG CTCGACCTCG CCGCCACTGA TCCCGTGCGC
CGGCGTTTCC GGTTCTCGGA CTCCGATATC GAGCGGCTCC GGGAATGGGC CGGTCCGTCG
GGCGCCCGCT GGGGCCTCGA CGCCTCGGGG CGGGAACGCT TCGGGCTCGG CGGTTTTCCG
CAGAACACCC TCGCGACTGC GCTTGACCGC ATCGTGCTCG GCGTGGCCGC GGACGAGACG
GAGAGCCAGT GGCTCGGGCT CGGTCTGCCG CTGGACGACG TCGATTCCAC CGATATCGAC
CTGGTGGGGC GGTTCGCCGA CTACCTCGAC GTACTCACCC GGGCCACCGC GGACTCCCGC
GGCCGACGCA CGGCGCAGGC CTGGGCCGAG TCACTCAACG CCCTCGCGCT CGCCGTGGCG
GCCGTCGCGC CGAGTGAAGG TTGGCAGGTG ACCCAGGCGG GCCGCGAAAT CGCGACCGCG
CTGCGCGGCG GCGGCGACCG TGACCTCACG TTGCCCGAGG TGCGGGCGAT GCTGGCCTCG
CGACTGGCCG CCAAACCCAC CCGGGCGAAC TTCCGCACCG GTGAACTGAC CGTGTGCACC
CTGGTTCCGA TGCGATCGGT CCCGCATCGT GTGGTCGTGC TCCTGGGTCT GGACGATGAG
GTCTTCCCGC GCAGCACCCG CTACTCCGGC GACGATGTGC TCGGCCGCAC CCCGTGTGTG
GGCGAACGGG ATCCGCGCGC TGAAGACCGG CAGCTCTTTC TCGACGCGGT GACCAGCGCG
ACCGACCGAC TGCTGGTCTT CTACACCGGC GCCGACCCGG TGAAGGGAAC ACCGCGCCCG
CCCGCCGTAC CGGTCGCCGA GTTGCGAGAT GCCACCCGGG CCCTGCTGAC CGACTCGGAC
ACGACCGGAC TGGAGTTCCG GCATTCCCTG CAACCCTTCG ATTCCGACAA CTTCGATCCG
GATCGATTCG GGCTCACCGT GCCCTTCTCC TTCGATCCGG CCGCCTATGC GGGTGCGGTC
GCGGCGGGCG GCACACCGGA ACCGCCGGCG CCCTTCCTCG ATGGTCCGCT CGCCGCGGTC
ATCGAGGACG TGGACCTCGA ATCACTGCTG CGATTCTGCG AACACCCGGT CAAGGCCTTC
CTACGACAAC GCCTCGGGTT CACCGTTCCC GACCAGGACG AGGAGCTCGC CGAGGCGCTG
ACGATCGCGC CGGACGGCTT GCAGCGCTGG GATATCGGCG ATCGCATGCT CGCTTCCGCA
TTGGCGGGGG TGGAGTCCGA CAGATTCGCA GCGGCCGAGA TGCGCCGCGG CACGCTGCCG
CCGTTCGCCC TCGGTAGCGC GGTCCTCGAC GCGATCGCCG GCACTGTCGC CGAACTGTCG
CGAGTGGTCT CACCCCATCT GACGGGCCCG GCGACCACCG TTGACATCGC GGTCGACCTG
GGCGCGGGAC GGAGGTTGGT CGGATCGGTG CCGTCGGTGT ACCCGGGCGG CATCGTGCGT
TCGTCGTTCA GCAGGCTCGC GCCCAAGCAC CGGGTTGCGG CGTGGGTGTC ACTGCTCGCT
CTGGCGGCGG GCGGACATTC CGAGCGGTCG GCGGTCGCGA TCGGTCGCGG CCGATTCCGC
GGCGTGCTCA CCTCGCGGCT CACGGTGCCC GCAGATCCTG TGGCGGAGCT GCGCGCCCTG
GTCGATTTGC GCGACCGAGG GCTCACCGAG CCGCTGCCCC TGTTCCCTTC GGCCTCGGCC
GTCTACGCCG AACGCGGAAT CGCTGGCGAT TCCCAGCAGA TGGCGCTCGA TGCCGCGCGC
GGCGAGTTCG AGAGCGGTTT CGGCGATGGC AAAGATCGCT CCATCCGCTA CGCATTGGGG
GAGTCGGCCT TCGACGACGC GCTGGGGCCG CCCCGCGGAA GCGAAGCGGA GTTCTCCCGC
GCGGGAACCC GATTCGGCGC CCTCGCCGCC CGCCTGTGGG TGCCACTGCT GACCCACGAG
GAGATGAACT GA
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| Protein sequence | MLTVHRSERG DVLVDALAEV LATPGADPFA AEVVAVPARG VERWITQSLA ARLGIAANID
FPTPDALVAA AVAAASGIAL DDDPWRGERL VWLVLAAVDE LAFEPGGEVL ARHLGVTRPG
GWAEQPGHRP RRRYPTADML AGLLRSYGAN RPGMLVDWTA GRETDGTGGA LPADLRWQAE
LFRRVRDLAG VPSPAERLDA ACARLRDEPA LVALPSRFSV YGPTRLPADQ ATVFAALAAH
RDVHLWLPHP SPALWAASRE RPSAAVGAAV PRVPGATATN PLLASLGREA SELQERVSPV
AGADVHHPAP ARPGTLLGRL QAAVAGDAPL PAGTAEPDGT VEFHACHGAA RMIEVLRERL
VRLFEDDPTL QPREVLVTCP DIESYAPLIR SAFGQAVSGA GAVESGDPVH PGQRLRVRLA
DRSLRFANPL LDALVTVLEL ADGRATVAQV LDLAATDPVR RRFRFSDSDI ERLREWAGPS
GARWGLDASG RERFGLGGFP QNTLATALDR IVLGVAADET ESQWLGLGLP LDDVDSTDID
LVGRFADYLD VLTRATADSR GRRTAQAWAE SLNALALAVA AVAPSEGWQV TQAGREIATA
LRGGGDRDLT LPEVRAMLAS RLAAKPTRAN FRTGELTVCT LVPMRSVPHR VVVLLGLDDE
VFPRSTRYSG DDVLGRTPCV GERDPRAEDR QLFLDAVTSA TDRLLVFYTG ADPVKGTPRP
PAVPVAELRD ATRALLTDSD TTGLEFRHSL QPFDSDNFDP DRFGLTVPFS FDPAAYAGAV
AAGGTPEPPA PFLDGPLAAV IEDVDLESLL RFCEHPVKAF LRQRLGFTVP DQDEELAEAL
TIAPDGLQRW DIGDRMLASA LAGVESDRFA AAEMRRGTLP PFALGSAVLD AIAGTVAELS
RVVSPHLTGP ATTVDIAVDL GAGRRLVGSV PSVYPGGIVR SSFSRLAPKH RVAAWVSLLA
LAAGGHSERS AVAIGRGRFR GVLTSRLTVP ADPVAELRAL VDLRDRGLTE PLPLFPSASA
VYAERGIAGD SQQMALDAAR GEFESGFGDG KDRSIRYALG ESAFDDALGP PRGSEAEFSR
AGTRFGALAA RLWVPLLTHE EMN
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