Gene Tpau_2216 details

Gene Information

• Locus tag: Tpau_2216
• ID: 9156372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 2306851
• End bp: 2307528
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 70%
• Product: GntR domain protein
• Protein accession: YP_003647164
• Protein GI: 296139921

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.981571
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGCCCG TACGACGACA GACCTTGATC GCGCAGGTCA CCGAGCAACT CCGCGCCGAG 
ATCGCAGGTG GCCGTTGGCC TGTGGGCAGC CGGATCCCCA CCGAGACCGA GCTGCGCGAG 
CTCACCGGTA CCGCGCGCAA CACCGTCCGT GAGGCCGTGC AGGCGCTCGT CCATGCCGGA 
ATGCTGGAGC GCCGCCAGGG GTCGGGAACC TACGTGCTGT CGGCATGCGC CTCCTCGGCG 
CTGGGCGACT ACTTCTCCGC AGCACGCGAC ACCGACCTTC TGGAACTGCG CGAGGCGCTC 
GACGTGACCG CCGCGGGCCT CGCCGCGCTC CGCCGCGACG AGGACGACAT CATCGAGCTT 
CGCCGCCTGC TCGCTCGCCG CAACGAATTG TGGTCGCCGG AGCGGGTGGC CGCGGGCAGT 
GAGGAGGAGG CGGTGCGGGC CGACCTCGCC ATGCACCGCG GCATCGTCGC CGCCAGTCAC 
AACACCGTTT ACCTCGAGTT CTACGACTCC CTCGTGCCGG TTCTGCAGGA GCAGCTGGAG 
GAGTTCCCCG TCGGTGCCGC AACCTCGTAC GAATCGGGTC ACATCACGCT CGTCGAGGCG 
GTGATCGCCG GCGACGCCCA GGGTGCGCGG GATGCGGCGC AGCATCTGCT CAACGAGGTT 
CGGCTGCGTC GCCGCTGA 

 

Protein sequence

MQPVRRQTLI AQVTEQLRAE IAGGRWPVGS RIPTETELRE LTGTARNTVR EAVQALVHAG 
MLERRQGSGT YVLSACASSA LGDYFSAARD TDLLELREAL DVTAAGLAAL RRDEDDIIEL 
RRLLARRNEL WSPERVAAGS EEEAVRADLA MHRGIVAASH NTVYLEFYDS LVPVLQEQLE 
EFPVGAATSY ESGHITLVEA VIAGDAQGAR DAAQHLLNEV RLRRR