Gene Tpau_1914 details

Gene Information

• Locus tag: Tpau_1914
• ID: 9156069
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1998207
• End bp: 1998824
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 64%
• Product: transcriptional regulator, TetR family
• Protein accession: YP_003646866
• Protein GI: 296139623

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGATCCA AAGAGAGTTT CATCGGGCAG ACCAGGCGTC GACAACTGGT GCAGATCGCG 
ATCGAAACCA TCGCCGAACT CGGCTACGCG CAGGCCTCCG TGCGAAAGAT CGCCGAGCGC 
GCCGACGTGG GCCTCAGCGT GGTGATGCAT CACATCGGCC ACAAGGATGA CCTGGTCGCG 
GCTGTGGTGG CCGAATGCTA TCGGTCGCTG TTGGAAACGA TGCGCCCGGC GGTCACCGCC 
GAAACGACGG CGACCGGGAA GCTGGCGGCA CATATTCGTG CGCATATCTC CTTTATCGAG 
AGCCACCGCT CTCATCAGAT CGCGCTGACC GAGATCGCCA CCGGGTACCG CTCCGCGGAC 
GGTCGTAGGG TGCAGGATCT CGATGTGGAT CCGGAGTTCG CGGAAGCTCT GGCCGAGGTC 
GAGCTGGAAC GGATCTTCCG GGACGGCATC GTATCCGGCG AATTCCGTGA ACTATCCGCA 
GACTCGATGG CCACGGCGGT CCGCGGGGCG ATCGGCGCAG CCCTCATGCG ATCGATCGCC 
GCCCCGGATG CCGACCTCGC CGGGTATGGC GAGGACCTGG TCGATGCGTT CACCCGCGCC 
GTGCGAGCGA AAGAGTAA 

 

Protein sequence

MRSKESFIGQ TRRRQLVQIA IETIAELGYA QASVRKIAER ADVGLSVVMH HIGHKDDLVA 
AVVAECYRSL LETMRPAVTA ETTATGKLAA HIRAHISFIE SHRSHQIALT EIATGYRSAD 
GRRVQDLDVD PEFAEALAEV ELERIFRDGI VSGEFRELSA DSMATAVRGA IGAALMRSIA 
APDADLAGYG EDLVDAFTRA VRAKE