Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1791 |
Symbol | |
ID | 9155941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 1871267 |
End bp | 1872037 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003646748 |
Protein GI | 296139505 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.319605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACTC CCGCAGAGAC CGCGCCCACC GGCGCGGCCC CGATGATCGA GATCCAGTCA GCCGACAAAT ACTTCGGCGA TCTTCACGTA CTCAAGGACA TCAACTTGAC GGTGCCCAAG GGGCAGGTCG TGGTCGTGCT CGGCCCGTCG GGCTCGGGCA AGTCCACTCT GTGCCGCACC ATCAACCGGC TCGAGCCGAT CAACTCCGGC ACCATCCGGA TCGACGGATC GGTGCTGCCG GAGGAGGGCC GCGGCCTCGC CGCGCTGCGC GCCGATGTCG GCATGGTGTT CCAGTCCTTC AACTTGTTCT CGCACAAGTC GATCATCGAC AACGTGACTC TCGCGCCGAT GAAGGTGCGT AAGAAGTCGG CCGCCGACGC CCGCAAGCGC GGTATGGAGC TGTTGGACCG AGTGGGCATC GCGAGCCAGG CCGATAAGAT GCCGGCGCAA CTCTCCGGCG GCCAGCAGCA GCGCGTGGCG ATCGCGCGCG CGCTGGCCAT GGAGCCGAAG GTGATGTTGT TCGACGAGCC GACCTCGGCA CTGGACCCCG AGATGGTCAA CGAGGTCCTG GACGTGATGG TCTCCCTCGC CAAGGAGGGC ATGACGATGG TGGTCGTGAC GCACGAGATG GGCTTCGCCC GCAAGGCCGC CGACCGCATT CTGTTCATGG CCGACGGTGC GATCGTCGAG GACACCGATC CCGAGTCCTT CTTCAACACG CCGAAGTCCA GCCGCGCCAA GGACTTCCTG TCGAAGATTC TGAGCCACTG A
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Protein sequence | MTTPAETAPT GAAPMIEIQS ADKYFGDLHV LKDINLTVPK GQVVVVLGPS GSGKSTLCRT INRLEPINSG TIRIDGSVLP EEGRGLAALR ADVGMVFQSF NLFSHKSIID NVTLAPMKVR KKSAADARKR GMELLDRVGI ASQADKMPAQ LSGGQQQRVA IARALAMEPK VMLFDEPTSA LDPEMVNEVL DVMVSLAKEG MTMVVVTHEM GFARKAADRI LFMADGAIVE DTDPESFFNT PKSSRAKDFL SKILSH
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