Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1790 |
Symbol | |
ID | 9155940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 1870296 |
End bp | 1871267 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_003646747 |
Protein GI | 296139504 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGAC ACAGGAGCAC CCGACTGGTC GCGGTGGTGA TCGCGGCGAT CGCCATGGTG GGCGGCCTCG TGGCGTGCGG CAGCACCGGT CCCCGCGACC TGCTCAAGTC CATCGAGTCC GGTTCCGTGA TCCTCGGCAC GAAGTACGAC CAGCCCGGCC TCGGCCTGCG CAACCCCGAT AAGTCGATGT CCGGGTTCGA TGTGGACGTC AGCTCCTACG TGGTCAAGTC GATCGCCCAG GCGAACGGCT GGAAGGAGCC GAAGACCCGC TGGCGCGAGA CCCCGTCGGC GCAGCGCGAG ACGCTGATCA ACAACGGCGA GGTGGACATG ATCGCCGCGA CGTACTCGAT CAACGCGAAC CGCTCGAAGA AGGTCGATTT CGCGGGGCCG TACCTCGTGG TACGGCAGGG CCTGCTGGTC CGCAAGGATG ACACCAGCAT CACCCAGCTC ACCGATCTCA ACCAGGGTAA GAAGCTGTGT TCGGCGGCGG GTTCGACATC CGCACAGAAC GTGAAGGCAC AGCTGCCCGG CGTGCAGCTG CAGGAGTTCG ACTCGTACTC CACCTGCACG GAAGCGCTGC ACCAGAAGAG CATCGACGCG CTCACCACCG ACGAGTCGAT CCTGGCCGGA TTCAACCAGC AGTACGGCGG CGAGTTCCGT GTGGTCGATA TGACCTACAT CGCCGATCAG TGCATCAAGG GCTCGCAGAA GAAGGCGGGC AGCCCGTTCT CCACCGAGCG TTACGGCATC GGTCTGGCCA AGGGGCAGAA GAAGACCCAG GAGGCGATCA ATGCCGCGGT CAGTGCGATG ATCGCCGACG GCAGCTGGGA GAAGGCCCTG CGGAAGAACC TCGGTGACGA GGAGACGCAG CGCCTGATCG ACCGTGCCGG CGGATTCGAC AAGTTCACGC CGTCGGTCGG CGACCTCGCG TTCGTGAGCG CCCCGTCGAC GAAGTGCGGA GGTGCCTCGT GA
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Protein sequence | MSRHRSTRLV AVVIAAIAMV GGLVACGSTG PRDLLKSIES GSVILGTKYD QPGLGLRNPD KSMSGFDVDV SSYVVKSIAQ ANGWKEPKTR WRETPSAQRE TLINNGEVDM IAATYSINAN RSKKVDFAGP YLVVRQGLLV RKDDTSITQL TDLNQGKKLC SAAGSTSAQN VKAQLPGVQL QEFDSYSTCT EALHQKSIDA LTTDESILAG FNQQYGGEFR VVDMTYIADQ CIKGSQKKAG SPFSTERYGI GLAKGQKKTQ EAINAAVSAM IADGSWEKAL RKNLGDEETQ RLIDRAGGFD KFTPSVGDLA FVSAPSTKCG GAS
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