Gene Tpau_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1709 
Symbol 
ID9155859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp1784358 
End bp1785107 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646666 
Protein GI296139423 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.289801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTCTA GCGATCCGCA ACAGCCCGGC ACCGGGGAGA ACGATCCGAC GGTGATCGCG 
CCGCAGGCAG ACGGAACCGC GCAGCCCTCG ACGGGGGATG CCGAGGCGCC GACCACGGTC 
CACTCCACGA CACCGGATCC GTACGCCGCT CCGGCCGATC CCTACGCCGT ATCGAACCCG 
TACACCGCCC CGCCGAATCC GTACGCTCCC GCGGATCCGT ACGCCGCCCA GCAGAACCCG 
TACGCCCCGT CCGACCCGTA TGCGGCCCAG CCGAACCCGT ACGCCCCCTC CGACCCGTAC 
GCGGCCCAGC AGAACCCGTA CGCCCAGGCG GGCCAGGCGG ATCCCTATGC GCAGGCCGAT 
CCGTACGCGC AGGCGCCGCA GGGCGGTGCA CTGCCGCAGT ACCCGGCCTA CCCGAATCCG 
AACGGCCTCG GCTACCCGAC CTACGGTCAG CCCGCGCAAT CGGGCACGAA TGGCCTGGCG 
ATCGCTTCGA TGATCCTCGG CATCGTCTCG CTGCCCGCGT CCTGCTTCTG GGGCTCCGGC 
CTCCTGTTCG CGATTCCCGC GGTGATCATG GGCTTCATCT CGATGAACCA GACCAAGAAG 
ACCGGCCAGG ACGGCTATGG CATGGGCCTG ACCGGCGTCA TCACCGGCGC CGTCTCGATC 
CTGCTCGCGA TCGCCGCGAT CATCTTCTTC ATCGCCGTGC TCGCCTCGGA CCCGTCGTCG 
ACCGACTACC TACTCGGCGT GCTGCGCTGA
 
Protein sequence
MTSSDPQQPG TGENDPTVIA PQADGTAQPS TGDAEAPTTV HSTTPDPYAA PADPYAVSNP 
YTAPPNPYAP ADPYAAQQNP YAPSDPYAAQ PNPYAPSDPY AAQQNPYAQA GQADPYAQAD 
PYAQAPQGGA LPQYPAYPNP NGLGYPTYGQ PAQSGTNGLA IASMILGIVS LPASCFWGSG 
LLFAIPAVIM GFISMNQTKK TGQDGYGMGL TGVITGAVSI LLAIAAIIFF IAVLASDPSS 
TDYLLGVLR