| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1558 |
|---|
| Symbol | |
|---|
| ID | 9155708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 1626541 |
|---|
| End bp | 1627425 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | hydrolase |
|---|
| Protein accession | YP_003646518 |
|---|
| Protein GI | 296139275 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.530388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGG AGATCTACGA GGTCGGCCCG GGCGGACCGT ACGCACTGGT CACCGGACCC
GACGGTGCCC TGTGGTTCAC CCTGGTCGAC AGCGGCGAGA TCGGACGCCT GGACCCGGCC
ACCGGCACCG TCGATCGCCA TCCGGTCGGG GCGGGCACCG GCCCCACCGT GATCACGGTC
GGCCCCGACG GTGCGCTCTG GTTCACCGAA TACCGCGCCC ACCGCATCGG GCGGATCAGC
ATCGCGGGCA CCGTGACGCA CCACGACCTG CCAGCCGGCA GTGGACCGTT CGGCATCGTC
ACCGGACCCG ACGGTGCGCT GTGGTTCACC CAGACCGCGA CCGACCGGAT CGGCCGGATC
ACCGTTGCCG GCGAGGTGAC GGAATTCCCG CTCCCCATCG CGGGGGCCTT CCCCTCGGCC
ATCACCGCGG CGCCGGACGG CGCACTGTGG TTCACGCTGA ACGGCGCCGA CGCACTGGGC
CGCGTCGAGG CCGGCGGCGC GATCTCGATC CACCCACTCG ACGCCCCCGG CTGCGCCCCG
GTCGGGATCG CCGCAGCCTC CGACGGAGCG CTGTGGATCG CCGAGATCGG AGCCGGGCGC
GTGGCCCGGA TGACACCCGG TGGCGACATC ACCCGCGTCG CCCTGGGCGA CCCGAACCCG
CGCCCGCACG CCGTGTGCTT CGCCCCCAGC GGAACGGTGT GGGTCACCGA ATGGGCCGGC
AACGCCGTCA CCGAGGTCGC CCCGGTCGGC ACCGTCACCC GCTATGAACT GCCCGTTCCC
GGTTCCGAAC CGCACGGCAT CACGGTGGGA CCCGACGGTG CGGCCTGGGC AGCCCTGGAA
TCCGGGGCGT TGGCCCGGAT CCTGCCGGAA ACCACATCCA TGTGA
|
|---|
| Protein sequence | MSTEIYEVGP GGPYALVTGP DGALWFTLVD SGEIGRLDPA TGTVDRHPVG AGTGPTVITV
GPDGALWFTE YRAHRIGRIS IAGTVTHHDL PAGSGPFGIV TGPDGALWFT QTATDRIGRI
TVAGEVTEFP LPIAGAFPSA ITAAPDGALW FTLNGADALG RVEAGGAISI HPLDAPGCAP
VGIAAASDGA LWIAEIGAGR VARMTPGGDI TRVALGDPNP RPHAVCFAPS GTVWVTEWAG
NAVTEVAPVG TVTRYELPVP GSEPHGITVG PDGAAWAALE SGALARILPE TTSM
|
|---|
| |