Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0899 |
Symbol | |
ID | 9155039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 918376 |
End bp | 919989 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | chaperonin GroEL |
Protein accession | YP_003645872 |
Protein GI | 296138629 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.187431 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAGC AGATCGCATT CGACGAGAAC GCACGCCGCA GCCTGGAGGC CGGCGTCGAC GCTCTCGCCG ACGCGGTGAA GGTGACCCTC GGACCTCGCG GCCGGCACGT GGTGCTGGCC AAGGCGTTCG GTGGCCCCAC CGTCACCAAC GACGGCGTCA CCATCGCCAA GGAGATCGAG CTCGACGATC CGGTCGAGAA CCTCGGTGCC CAGCTGGTGA AGTCCGTCGC TACCAAGACC AACGACATCG CGGGTGACGG CACCACCACC GCGACCGTGC TCGCCCAGGC CCTCGTCAAG GAGGGCCTGC GCAACGTCGC GGCCGGCGCC AACCCGATCG AGTTCGGCAA GGGCATCGCC GCGGCCGCCG ACGCCGCGTC CGAGATCCTC ATCTCGCAGG CCACTGAAGT GGACGGCGAG AAGGCGATCG CGCAGGTCGC GACCGTCAGC TCGCGTGACG CCGAGCTCGG CGAGATGATC GGCTCCGCGA TGACCAAGGT GGGCGCCGAC GGCGTCGTCA CCATCGAGGA GAGCTCCGGC GTCGAGACCG ACGTCGTAGT CACCGAAGGC GTGCAGTTCG ACAAGGGCTA CATTTCGCCG AACTTCGTCA CCGACCTCGA ATCCCGCAAG GTCGTCTTCG ACGACGCACT GGTGCTGCTC TACCGCGACA AGATCAGCTC GCTCCCGGAC TTCCTCCCGC TGCTGGAGAA GATCCTGGAG ACCGGTAAGC CGGTGCTCAT CGTCGCCGAG GACGTCGAGG GCGAGCCGCT GTCGACGCTG GTCCTCAACA CTCTGCGCAA GACGATCAAG GCCGTCGCCG TGAAGGCGCC GTTCTTCGGT GATCGCCGCA AGGCCTTCCT GGAGGACCTC GCCATCGTTA CCGGCGGCAC CGTCATCAAC ACCGACCTGG GCCTGAGTCT GGCCACGGCC GGCATCGACC TGCTGGGCAC CGCCCGCCGG GTCGAGGTGA CCAAGGACGC CACCACCATC GTCGATGGTG GCGGCTCCAA GGAGGCCGTG CAGCAGCGGT CCGCACAGAT CAAGGCCGAG ATCGAGAACA GCGACTCCGA CTGGGACCGC GAGAAGCTCT CCGAGCGGCT CGCGAAGCTG GCCGGCGGCG TGGCCGTGAT CCGCGTGGGC GCCAACACCG AGACCGAGCT CAAGGAGCGC AAGTACCGCG TCGAGGACGC GGTGTCCGCT GCGCGGGCCG CGGTCGAGGA GGGCATCGTC TCCGGCGGCG GTACCGCGTT GGTCAAGGTC AGCGCGCAGC TGGCGGATCT GGAGGACACG TCCGAGGGCG ATTTCAAGCT GGGCGTGCGG GCCTTCCGCC GGGCGCTCAC CGCTCCGCTG TTCTGGATCG CCAGCAACGC CGGCGAGGAC GGCGCCGTCA TCGTCAACCA GGTGACCGAG ACCGGTAAGG GCTTCAATGC CGCCACGCTG GCCTTCGGCG ACCTGATCGC CGACGGTGTC ATCGATCCCG TCAAGGTGAC CCGTAGCGCT GTGGTGAACG CCGCGTCGGT GGCGCGGATG ATCCTTACGA CCGAGGCCAC CGTGGTGGAC AAGCCGGTCG AGGAGGACGA CGACGCGCAC GCCGGTCACG GCCACGCGCA CTAG
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Protein sequence | MAKQIAFDEN ARRSLEAGVD ALADAVKVTL GPRGRHVVLA KAFGGPTVTN DGVTIAKEIE LDDPVENLGA QLVKSVATKT NDIAGDGTTT ATVLAQALVK EGLRNVAAGA NPIEFGKGIA AAADAASEIL ISQATEVDGE KAIAQVATVS SRDAELGEMI GSAMTKVGAD GVVTIEESSG VETDVVVTEG VQFDKGYISP NFVTDLESRK VVFDDALVLL YRDKISSLPD FLPLLEKILE TGKPVLIVAE DVEGEPLSTL VLNTLRKTIK AVAVKAPFFG DRRKAFLEDL AIVTGGTVIN TDLGLSLATA GIDLLGTARR VEVTKDATTI VDGGGSKEAV QQRSAQIKAE IENSDSDWDR EKLSERLAKL AGGVAVIRVG ANTETELKER KYRVEDAVSA ARAAVEEGIV SGGGTALVKV SAQLADLEDT SEGDFKLGVR AFRRALTAPL FWIASNAGED GAVIVNQVTE TGKGFNAATL AFGDLIADGV IDPVKVTRSA VVNAASVARM ILTTEATVVD KPVEEDDDAH AGHGHAH
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