Gene Tpau_0821 details

Gene Information

• Locus tag: Tpau_0821
• ID: 9154961
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 833203
• End bp: 833871
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 71%
• Product: Transglycosylase domain protein
• Protein accession: YP_003645796
• Protein GI: 296138553

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.137438
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAAAC CCCTCAGCAT GTCCGGTCGC CACCGTAAGC AGTCCACCAC CGGCCGCACC 
GCAGCCAAGG TCGCCGCCAC CGGCGCCCTC CTCGGCGGTG CCACCCTCGC CTTCTCGGCG 
CCCGCGGCGA ACGCCGCGCC CGACTCCCAG TGGGATCAGG TCGCCAAGTG CGAGTCCGGC 
GGCAACTGGT CGATCAACAC GGGTAACGGC TACCACGGCG GCCTGCAGTT CAGCCCGTCC 
ACCTGGAGCG CCTACGGCGG CCAGAAGTAC GCTCCCACCG CGAACCAGGC CAGCAAGGCC 
CAGCAGATCG CGATCGCGGA GAAGGTCCTC GCGGGCCAAG GTAAGGGCGC ATGGCCCTCG 
TGCGGAACCG GCCTCGGCGC GGCGACCCAG CGCGACGTTC CCACCGAGTC GGCCGCCTCT 
CCGGCCAAGC CGGCCGTTCA GAAGCCGGCC GTCCAGAAGC CGGCCATTCA GAAGCCCGCC 
GCCCAGAAGC CCGCCGCCCA GAAGCCCGCT GCCCAGAAGC CGGCCGCCCC GAAGCCGGCC 
GTCAAGCCCG GTCAGTCGGT CAACGCGGCC TACATCCAGC AGGTCATCTC GCAGGCGCAG 
AACGGTGGCC AGCAGGTCGA CCCGGCCGTG CTGGCGATGC TGCAGCAGGC TGCCGCCAAG 
GGCTACTGA 

 

Protein sequence

MGKPLSMSGR HRKQSTTGRT AAKVAATGAL LGGATLAFSA PAANAAPDSQ WDQVAKCESG 
GNWSINTGNG YHGGLQFSPS TWSAYGGQKY APTANQASKA QQIAIAEKVL AGQGKGAWPS 
CGTGLGAATQ RDVPTESAAS PAKPAVQKPA VQKPAIQKPA AQKPAAQKPA AQKPAAPKPA 
VKPGQSVNAA YIQQVISQAQ NGGQQVDPAV LAMLQQAAAK GY