Gene Tpau_0713 details

Gene Information

• Locus tag: Tpau_0713
• ID: 9154849
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 729827
• End bp: 730627
• Gene Length: 801 bp
• Protein Length: 266 aa
• Translation table: 11
• GC content: 68%
• Product: MspA family protein
• Protein accession: YP_003645689
• Protein GI: 296138446

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0146095
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCATCTC GCACAACACA TGCCCTCATA GGTGCCACCG CCGCCCTGGC GGCCGCGCTC 
ACGGTCGCCC CCGTGGCGAC CGCGGCACCG TCGCCGGCGC CGAAGCCGGC CTCGGATACC 
AAGCCCAAGC CCGACGATCA GTTCGCCGAT AGCTCCCGGA CCGTCGTGAC CCGTGACGGA 
TGGAAGATGG TGGTCACCAA GACTTCGGAG GCGCTGCGGT CGGTGCCGCC GCTGAACCGC 
TCGCCGCAGT CCTTCGAGGC GTTCTCCACC ATCGGTGGCG AGGCCACCGT CGCGGTCGCC 
GATCCGAAGA AGCCGCCGAA GTCGAAGGTC AAGTCCGCCG TGCTCACAAC GGGGCTCCAG 
GTGGGATGTG CCGTGACTGC CGACAGCCTC ACGGTGGGCG GCAGCATCTC CAACGCCACG 
AACGTGGGCG TGACTCCGTC GGTGACCGCG AACCTCACGG GTACCGCGAC CGGCCAGGGA 
GGTACCTCAG GAGGCAGCGG CGGCGGTAGC GTGTCCGCCG GTGTGACGCC GGGGATTTCG 
GCCACCGTGG GCGACACGCT CACTGAGACC GGATCGATCT CGGGTGTGAT CAAGCCGGGT 
ACCAGCAAGG ATATCCCGTA CGCCAAGAAG AACCTTGAGG GTCCCGATGC GGCGACGTAC 
ACCCGTGAGG TGCGGGTGGC GGTCGACAAC TGCATCGGCG GCGTCCAGGT GCGCTCGTAC 
GCCACCATCG CGCTGCAGAC CGACCGCACC GACGACTCGA TCACCACGTA CGGCAAGCCG 
ATCTTCATCA CCCGCCCGTG A 

 

Protein sequence

MPSRTTHALI GATAALAAAL TVAPVATAAP SPAPKPASDT KPKPDDQFAD SSRTVVTRDG 
WKMVVTKTSE ALRSVPPLNR SPQSFEAFST IGGEATVAVA DPKKPPKSKV KSAVLTTGLQ 
VGCAVTADSL TVGGSISNAT NVGVTPSVTA NLTGTATGQG GTSGGSGGGS VSAGVTPGIS 
ATVGDTLTET GSISGVIKPG TSKDIPYAKK NLEGPDAATY TREVRVAVDN CIGGVQVRSY 
ATIALQTDRT DDSITTYGKP IFITRP