Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0632 |
Symbol | |
ID | 9154768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 651811 |
End bp | 652491 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003645609 |
Protein GI | 296138366 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.639401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACAACA ATGAGGGCAT GCGCCAGACC ACACCGCGAC GAGGCCGGCC GCCGAGCACC TCCCGCGAGG AGATCGTCGA GCACGCGATG CGCCTGCTCG ACGAGCACGG CGTCCACGGG GTCACCATGA AACTGCTCGC GACCGAGATC GGAGTGAGTC CGATGGCTCT GTACCGACAC GTCGACGACA AGGAGACGCT GCTGGCTCTC GCACTCGATG CGATCGCAGA ACCGTTCGCG TCCATGGACT TTCCCGATGA TCCACGCGAG CGGATCGTCG CCGCCATGAC CACCGTGTAC GACTCGCTCG TCGAACACCC GTGGGTACCG GAGGCCCTGA TCGGCCCGCA ACGCTCAGGA CGCGGGGCGC TGCACATCAG CGATGCGGCG ATCGGCGCGG CATATCGGAT CACCGGAGAC CGGGAGGCGG CACTGCGTGC CTACCGCGCC TGCTGGAGTC TCACCCTGGG CACGGTGCTG ACCCATCTGC GAGCCAAGGC CGAATCGAAC GAGGCCGCCA CCGAGTGGAT GATCAATCTG CTGGACTCCC TGCCACCGAA CTCGGCGCCG GACATGCGCG CCGCGGTGCA GGCGCGGATA CCGCCTTCCG GCCGAGATGA TTTCGAGGCG AGCCTACGAG CCCTCCTGCA CGGCCTGTTC GGCCCCGATC AGAACGGCTG A
|
Protein sequence | MNNNEGMRQT TPRRGRPPST SREEIVEHAM RLLDEHGVHG VTMKLLATEI GVSPMALYRH VDDKETLLAL ALDAIAEPFA SMDFPDDPRE RIVAAMTTVY DSLVEHPWVP EALIGPQRSG RGALHISDAA IGAAYRITGD REAALRAYRA CWSLTLGTVL THLRAKAESN EAATEWMINL LDSLPPNSAP DMRAAVQARI PPSGRDDFEA SLRALLHGLF GPDQNG
|
| |