Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0623 |
Symbol | |
ID | 9154759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 643089 |
End bp | 644366 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003645600 |
Protein GI | 296138357 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.456503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCCA CACCACTGAC CCCGGCCGCG GCGGACGCAG CGCTGCGCTC GGTAGGTTCA CCGAGAGCCT GGGGCGCGTT GCTGTGCTGG ATGGTCGTCG TGTTCGAGGG GTACGACCTG GTGTCCCTTG GCGCCGCGAT TCCCGCGCTG CTCGACACCG GGCACCTCGG AATGACCGCA TCGGACCTGC GCGCCGTCGC CACGGTCTCG CTGGTCGGCG TCGGCATCGG TGCGGCGGTC ACCGGTGCGA TCTCCGACCG CTACGGACGC CGCGGCCCAC TCGTGGCGTG CGTGCTGTTG TTCTCCGTGT TCACGCTGCT GGTTCCGGTC ATGCCCACGG TGTGGGCGCT CGCCGCCGTC CGGTTCATCG CCGGCCTCGG CATGGGCGGC TGTATGCCGG TGGCGCTCAC TGCAATGCAA GAGGCTGCGC CCGAGCGAAA ATCGAACGCC AGCGCGGTCA CGATGACCGG CTATCACGTG GGTGCAGTCC TGGCCTCGCT GATCGCATTG CTCGCCGGAA ACTCGTGGCA GTGGCTGTTC TACGGCGGCG GTATCCTCGG CCTGCTGTTG GTTCCGGTGA TCGCTCTCCG CATGCCGGAG ACCGCCGTCG TGGCCGGGAC CGCCAAACCG ATTGCGGCGC AGCGTGCCGA TCGTGCGTCG GTGCTGCAGG CGCCGTACCT GCGGACCACG CTCATGCTGT TCGTCGCCGC CTTCTTGGGG CTGCTGGTGG TGTACGGGCT CAACACCTGG CTGCCGCAAC TGATGCGTGG CGCCGGTTAC CCGGTGTCCA CCGCGCTGGT GATGCTGCTG GTGTTGAACG TGGGCGCGGT GGCCGGTTTG ATGATCGGCG GCAGGGTCGC GGACCGTCTT GGCGCGCAAC GGGTCACGGT GTTGTGGTTC GCCGCTGCCA GCGTGATGCT GGCGCTGCTG AGCATCAAGG TGGCCAACCA GGTGGTGCTC GACGTGGTGA TCTTCGTGAC CGGATTCTTC GTGTTCACTG CGCAGGTGCT GCTGTACGGC CTGATCGGAT ACCTCTATCC CCGAACGAAG GTCGGTACCG CGATGGGCCT GGTCTCCGCG GTCGGGCGCC TCGGTGCCAT CGCCGGGCCG TGGGTCACGG GCAGCCTCGT CGTGGCCGGT ATCGGATATC CCTGGGGCTT CTACTTCTTC GCCGTCGCGG CAGGCCTGGC GGCGCTGGCC GTGGTCGCGG TGCCGCGGCC CGCTCGCGAG GAGCAGGCTG CGGATTCAGC CGCGGAACAG GCCGCGCGCG TGGCGTGA
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Protein sequence | MASTPLTPAA ADAALRSVGS PRAWGALLCW MVVVFEGYDL VSLGAAIPAL LDTGHLGMTA SDLRAVATVS LVGVGIGAAV TGAISDRYGR RGPLVACVLL FSVFTLLVPV MPTVWALAAV RFIAGLGMGG CMPVALTAMQ EAAPERKSNA SAVTMTGYHV GAVLASLIAL LAGNSWQWLF YGGGILGLLL VPVIALRMPE TAVVAGTAKP IAAQRADRAS VLQAPYLRTT LMLFVAAFLG LLVVYGLNTW LPQLMRGAGY PVSTALVMLL VLNVGAVAGL MIGGRVADRL GAQRVTVLWF AAASVMLALL SIKVANQVVL DVVIFVTGFF VFTAQVLLYG LIGYLYPRTK VGTAMGLVSA VGRLGAIAGP WVTGSLVVAG IGYPWGFYFF AVAAGLAALA VVAVPRPARE EQAADSAAEQ AARVA
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