Gene Tpau_0443 details

Gene Information

• Locus tag: Tpau_0443
• ID: 9154578
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 466942
• End bp: 467712
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 65%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003645423
• Protein GI: 296138180

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCATCGA TCTTCATCTC CGGCGGTGCT TCCGGCATCG GCCGTGCCAC TGCCCTGCGT 
TTCCTGTCCG AGGGATGGAC CGTGGGCGTG TACGACGTCA ATCAGGCCGC GCTCGACGAG 
CTCACGGCAG AGCATCCGCA GATCGTCACC GGCATCCTCG ATGTGCGCGA CTTCGGGCAG 
TGGGAGGCCG CGCTCGCCGA TTTCGCCACG CACACCGGCG GCACCCTCAC AGTGCTCGAC 
AACAATGCGG GGGTGCTGTT CAGCGGAGAC CTCGATGAGG TCACACCCGA GCAGATCAAG 
CTGCAGATCG ACATCGACGC GTTGGGCGTC ACGTACGGCG CCAAGGCCGC GCTGCCCTAC 
CTCACGGGGG TCGAGGGTGC GCATCTGGTG AACATCAGCT CCGCCTCGGC CATCTACGGC 
CAGCCGGGTA TCGCCACCTA CAGCGCCGCG AAGTTCTACG TCTCCGGTTT CACCGAGGCG 
CTCGAACTCG AATGGGAGAA GCACGGCATC CGGGTCGTCG CGATCTGGCC GCTCTGGGCC 
AAGACCGCGC TCGCCGAGAC CGATGCGAAG AGCACTCGCA CCCTCGGCGT GAACATCACG 
CCCGAGGAGG TGGCCGAGCA GGTGTGGAAC TCTGTACACC CTGGTGTGCA GGTGCCCTTC 
CTGCCGCGCG TGCACTATTC CGTCGGAACT CTCACCACCC TGCTGTCCAA TTCGAGTAAA 
TTCGCACCGC GGTCCGTGGT GCGCCTGATC AACCGGTTCA CCAGCCAGTA G 

 

Protein sequence

MPSIFISGGA SGIGRATALR FLSEGWTVGV YDVNQAALDE LTAEHPQIVT GILDVRDFGQ 
WEAALADFAT HTGGTLTVLD NNAGVLFSGD LDEVTPEQIK LQIDIDALGV TYGAKAALPY 
LTGVEGAHLV NISSASAIYG QPGIATYSAA KFYVSGFTEA LELEWEKHGI RVVAIWPLWA 
KTALAETDAK STRTLGVNIT PEEVAEQVWN SVHPGVQVPF LPRVHYSVGT LTTLLSNSSK 
FAPRSVVRLI NRFTSQ