Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1682 |
Symbol | |
ID | 6165226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 1478244 |
End bp | 1478993 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641668847 |
Product | proliferating cell nuclear antigen PcnA |
Protein accession | YP_001795050 |
Protein GI | 171186131 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.950147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.718796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAC ACGTCATAAC CTATCTAGAT GCCAAGGAAT TCGCCTACAT CGTCGACGCC GTTTCCGTGT TGGTGGAGGA GGCCAACTTC GTCGTTAGAA GCGACGGTCT CTACTTGAGG GCCTTAGACC CGTCGAGGAC CGCCATGGTT GACCTCTCCA TACCTAAGGA GGCGTTCGAC GAGTTTCCAG AGGTCGAGGA GCTGCGGGTG GGGGTCAACT TCAAGGACCT CAAGAAGATC CTCAGGCGCG TCAAAAAAGG CGACAAGATC TCCATGGAGG TGGAGGAGGG GAGGATAAGG ATCAAGCTGG TGGGCAAGTC CGTGAGGTCG ATAACCCTGC CCTCGATAGA GGTGGTGGGG GAGGAGCTCC CAACGCCTAA GGTGGTGTAT ACGGCGATGG TGAAAACCGC AAGCGACGTC TTAGCTTCGG CGATAAAAGA CGCAGACGCC GTGGCGGACG AGGTGAAGTT CGAGGCTAAC GAGGAGGCGC TGGTGATAGG GGCGACGAGC GACAAGGGAG AGGTGGAGGT GAGGCTCGAC AAAAACAGCG AGCTGGTCTA CGAGTTCGAC GTGAAGGAGC CGGCGTCTGC CAGGTACTCG CTGGAGTACC TCGTGGACAT GGTGGGGAGG ACGTCGAAGA TCAGCGACAT AGTGACCATC GAGCTTGCCA CAGCCAAGCC GCTGTTGCTC ACCTTCGACA TACCGGCCGG CGGCAAGATA GCCTACTTCC TAGCCCCAAG GGTGGAGTGA
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Protein sequence | MSKHVITYLD AKEFAYIVDA VSVLVEEANF VVRSDGLYLR ALDPSRTAMV DLSIPKEAFD EFPEVEELRV GVNFKDLKKI LRRVKKGDKI SMEVEEGRIR IKLVGKSVRS ITLPSIEVVG EELPTPKVVY TAMVKTASDV LASAIKDADA VADEVKFEAN EEALVIGATS DKGEVEVRLD KNSELVYEFD VKEPASARYS LEYLVDMVGR TSKISDIVTI ELATAKPLLL TFDIPAGGKI AYFLAPRVE
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