| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1414 |
|---|
| Symbol | |
|---|
| ID | 6165380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 1258196 |
|---|
| End bp | 1259068 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641668569 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001794785 |
|---|
| Protein GI | 171185866 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2108] Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGG GTTGCGAGCT GTGTCTCCTC GGCGCTAAAA GCGTCATTTT CATAACTGGG
CTCTGCCCCT TGAGTTGCCC CTACTGTCCA GTCAGCGCCG AGAGGTTTGG AAAAGACGTC
ATGTATGTAA ACGACATGCC CGTGAGCAGG TTGGAGGATA TACCCAGGGT GGTGGCCGAG
TACGCCTCAG AAGGGGCGGC CATCACAGGC GGGGACCCCT CGGTGGTGGC GGAGCGCGTG
AAGACGGTGG CGGACCTCCT AAAGAGGGAG TTCGGCGAGG GCTTCCACAT ACACATGTAC
ACACACGTGT TGAACCTAGA CGGGAGAAGA GCCGGGCTGA TCGCGTCCAG CAGAGTAGAC
GAGGTGAGGA TCCACGCGAC GTCTATAAGC CAGGTGCGGG GGAGGGAGAA GTACGTAAAA
GCCTTGGCGG CCTCTGGGAA AACCGTGGGC GCCGAGGTGC CTGCGTTGCC GGGGCTAGAG
CGCCAGATCG CCGAGGCGGT AAACGCGCTG GCGCCGTACA TAAGCTTCGT AAACATCAAC
GAGCTCGACA TCTCCGAGAC CAACCGGGAG AGGCTAAGGG CTATGGGCTA CAAGGCGGAG
GGGCTAAACG TGGCAGGTAG CCTAGAGGCG GCGAGGAAGA TAGCGGAGAT GGTCACGGTG
CCGGCACACA TATGCACAGG AAGATCAAAG GACTTGATAC AGATGGGGAC CCGGCTGTTT
AGACACGCCA TGGCCACCGC CGCGCCGGCT GAACACGTCC AAGACGACGG CACCGTGGCG
TATGACGAAG AGGGGCGACA CCCCAGAAGC CTATCGGCGA GAAAGATTCG TATAAAGCTA
AAGACGGGAG AAAAAACCCT CGAGATACAA TAG
|
|---|
| Protein sequence | MAKGCELCLL GAKSVIFITG LCPLSCPYCP VSAERFGKDV MYVNDMPVSR LEDIPRVVAE
YASEGAAITG GDPSVVAERV KTVADLLKRE FGEGFHIHMY THVLNLDGRR AGLIASSRVD
EVRIHATSIS QVRGREKYVK ALAASGKTVG AEVPALPGLE RQIAEAVNAL APYISFVNIN
ELDISETNRE RLRAMGYKAE GLNVAGSLEA ARKIAEMVTV PAHICTGRSK DLIQMGTRLF
RHAMATAAPA EHVQDDGTVA YDEEGRHPRS LSARKIRIKL KTGEKTLEIQ
|
|---|
| |