Gene Tmz1t_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1376 
Symbol 
ID7084497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1530860 
End bp1531582 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content67% 
IMG OID643698393 
ProductABC transporter related 
Protein accessionYP_002355031 
Protein GI217969797 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.374961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGTG CCTTCACCCC TCATCCGGAG ATGCTCCGGA TCCACGACCT CCACGCCTTC 
TACGGCGAGT CGCACATCCT GCACGGCATC GACATCAAGG TGGCGCGCGG CGAATGCGTG
ACCTTGCTCG GGCGCAACGG CTCCGGACGC TCGACGACCT TGAAATCGGT GCTCGGCCTG
GTCGGCAAGC GCACCGGGTC GATCATGGTC AACGGCCGCG AGGTGATCGC CGAGCCCACC
CACCGCATGG CGCGCTACGG CATCGGCTAC GTGCCCGAGG AGCGCGCGAT CTTCGCCTCG
CTCAGCACCG AGGAGAACCT GATGCTGCCG CCGCAGGTGG CGAGCGGGGC GCTGTCGGTG
GAAGAGATCT ACCAGATGTT TCCCAACCTG CAGGAACGCC GCAACAGCCC AGGCTCCAAG
CTCTCGGGCG GCGAGCAGCA GATGCTGGCG ATGGCGCGCG TGCTGCGCAC CGGGGCCAAG
CTGCTGCTGC TCGACGAGAT CACCGAGGGG CTGGCGCCGG TGATCGTGAA GAAGCTCGGC
GAGGTCATCG TCGAGCTGAA ATCGCGCGGC TTCACCATCG TGCTGGTGGA GCAGAACTTC
CGCTTCGCCG CCCCGCTGGC CGACCGCCAC TACGTGCTCG AGCACGGCGA GATCATCGCC
ACCATCACCG CGGAGGAGCT CCCCGGGAAG ATGGACTGGC TGCACCAGAC GCTGGGGGTC
TGA
 
Protein sequence
MTSAFTPHPE MLRIHDLHAF YGESHILHGI DIKVARGECV TLLGRNGSGR STTLKSVLGL 
VGKRTGSIMV NGREVIAEPT HRMARYGIGY VPEERAIFAS LSTEENLMLP PQVASGALSV
EEIYQMFPNL QERRNSPGSK LSGGEQQMLA MARVLRTGAK LLLLDEITEG LAPVIVKKLG
EVIVELKSRG FTIVLVEQNF RFAAPLADRH YVLEHGEIIA TITAEELPGK MDWLHQTLGV