Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0371 |
Symbol | |
ID | 7084877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 420033 |
End bp | 420965 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643697401 |
Product | integrase family protein |
Protein accession | YP_002354049 |
Protein GI | 217968815 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.366696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCGC TCGGACAAGC GATTCAAGAC TATCTCGCCT TGCGCCGCAG GCTGGGGTTC AAACTCCGGG ATGCCGGGCT TTGCCTAGTG AAGTTCGCGG CATTCATGGA AGCCCGCGAC GCCCCACACA TCACGACCGC GCTGGCACTG GAGTGGATTC GCCAAAGTCC ATCGGTGACG CCTGCGACCT GGGCGCAGCG GCTGGGCTAC GTCCGTGGCT TCGCCCGCCA TCATGCGGCG AGTGACCCGC AGACTGAGGT GCCCCCGGCG GGTCTGCTGC CGTTTCGCCC ACGCAGGGCG CGACCCTACC TCTACTCCGA TGAGGACATC GCACAACTGC TTCGCAGCGC GCTCGATCTA CCGCCTGCCG GCGGCTTGCG CCCGTGGACG TATCACACAC TGCTCGGCTT GCTCAGCGTC GCCGGCCTGC GAGTTGGCGA GGCGATCCGC CTCATGGACG CGGACGTCGA TCTGCAGGAA GGGCTGCTGA CGATTCGCGG CACCAAGTTC GGCAAGTCGC GCCTCGTCCC GATCCATTCG TCAACGCTGG AGGTCCTGCA ACAGTACCGC GCCCACCGCG AACCCTTTCT CGCAGGCCAT GCAGCCTCGG CATTCTTCAT CACCGGTCGC GGTCATCATC TCGACATCGG TGATGTGCAT CGAACGTTCT ATCGCCTGTC GCGCCAAGTC GGACTGCGCG GCGCGACCGC CAGCCACGGT CCGCGCCTGC ACGACTTTCG GCACCGCTTC GCGGTCCAGA CGCTGTTGCG CTGGTACCGC TCGGGCGAGG ATGTCGAGCG ACGGTTGCCG GTGCTGTCGA CCTATTTGGG CCATGCCCAT GTCGCCGACA CCTACTGGTA TCTGAGCGCC TGTCCGGAGC TGATGGGACT GGCGGTCGGG CGTCTTGAAC GACGCTGGGG AGAACTGCCA TGA
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Protein sequence | MTPLGQAIQD YLALRRRLGF KLRDAGLCLV KFAAFMEARD APHITTALAL EWIRQSPSVT PATWAQRLGY VRGFARHHAA SDPQTEVPPA GLLPFRPRRA RPYLYSDEDI AQLLRSALDL PPAGGLRPWT YHTLLGLLSV AGLRVGEAIR LMDADVDLQE GLLTIRGTKF GKSRLVPIHS STLEVLQQYR AHREPFLAGH AASAFFITGR GHHLDIGDVH RTFYRLSRQV GLRGATASHG PRLHDFRHRF AVQTLLRWYR SGEDVERRLP VLSTYLGHAH VADTYWYLSA CPELMGLAVG RLERRWGELP
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