| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1256 |
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| Symbol | |
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| ID | 5297723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1263909 |
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| End bp | 1265018 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 640769529 |
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| Product | secretin/TonB, short N-terminal domain |
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| Protein accession | YP_001306490 |
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| Protein GI | 150021136 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCAG TGAAAAAAAT ACTTTTAATA ATCGTTTTAG TTTCAGTATT ATCATTTAGT
GTTGATGTGT ATTTTTATCA AACTGACATC AGAGATGCAC TAAGCCAATT TGCAATGCAA
GAAGGTATAA CTATAATATA CAGTCCTTCT CTAACAGGGT TTATAACAAT TGAACTATAT
AACACAACAA TAGAAAAAGC ACTTGATTAC ATGTTGTTGC CTTTAGGATA TTATTGGAAA
AAAATAGATA ATATCTATTT TGTTGGAACT GCCAATCCTA ACGATCCAAA TTTTTCCCTA
ATTTCAAACA AGTACATTAT AAAATTATCT TATGTTACCT TTGAAAATGT TTCTAACGCA
CTACCAAATG TTTTAAAAAA CTACATATAT CCAACTGCTT CCAAAAATGA ATTACTAATA
AATGCTCCAC CAAAAATTGC ATCACAAATT GCTGAAATAA TAAATCTAAT AGATAAAAAA
TCTCACATTG CAGAAATAAA AATTAAACTG TATGAAATTG ACGAAGAAGA TCTTAGAAAA
TTTGGAGTAG AATTTTCATC CAACGATGAA ACAACTACTC TAAAGGTAAG TTATAACAAC
AACGCCTTAC AACTTTCCTT AGACCTTATG GATACAAATC TTTTTGCAAT TATATCCGCA
TTAATAAGCT CTGGAAAAGC AAAAATCTTA ACGAATGGAA CTATTTTTCT TAAGGCAAAT
GAAAGTGCTA AAATTTCTGC ATATACAACA ATTGACTTTA CATTATCTAA TGATAAAGTA
ATAGAAAAAA AACTTCTAAA TGAAATAGAA ATAAGCGGAA CAGTTTTTGT TGATCATGTT
TCATTAAATC TAACTGCTAG AGCGGAAGCA CTTTCCCCTA GCAATAAGAC AATAGGATTA
ACATTCTCAA ATTCACTTGA TCTAAAGTAT AATAAACATT ACTATATAGC TGGGTTATCG
TTTGAAACGA CAAATAATAT TGAAAGCGGT ATACCTGGAT TAAAAGATTT ACCTATAATA
GGAAATTTAT TTAAAACTAA TGAAATAAAA AATAATAAGA AAATCATTAT AATATCTTTA
GAAGCTAAAT GGGCAGGTGA TATGAAATGA
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| Protein sequence | MRSVKKILLI IVLVSVLSFS VDVYFYQTDI RDALSQFAMQ EGITIIYSPS LTGFITIELY
NTTIEKALDY MLLPLGYYWK KIDNIYFVGT ANPNDPNFSL ISNKYIIKLS YVTFENVSNA
LPNVLKNYIY PTASKNELLI NAPPKIASQI AEIINLIDKK SHIAEIKIKL YEIDEEDLRK
FGVEFSSNDE TTTLKVSYNN NALQLSLDLM DTNLFAIISA LISSGKAKIL TNGTIFLKAN
ESAKISAYTT IDFTLSNDKV IEKKLLNEIE ISGTVFVDHV SLNLTARAEA LSPSNKTIGL
TFSNSLDLKY NKHYYIAGLS FETTNNIESG IPGLKDLPII GNLFKTNEIK NNKKIIIISL
EAKWAGDMK
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