Gene Tmel_0958 details

Gene Information

• Locus tag: Tmel_0958
• Symbol: rplV
• ID: 5297372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermosipho melanesiensis BI429
• Kingdom: Bacteria
• Replicon accession: NC_009616
• Strand: +
• Start bp: 991416
• End bp: 991865
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640769242
• Product: 50S ribosomal protein L22
• Protein accession: YP_001306204
• Protein GI: 150020850
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0091] Ribosomal protein L22
• TIGRFAM ID: [TIGR01044] ribosomal protein L22, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.00139982
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGTTC TCATAAAGAG AAATGGAATG AAACGTTCCA AGTTTCATAG GGAAAGAAAA 
GAAAAATTAG CATCAATGCC CATTTATGAA GCAAGAGCAG TGGCAAAGTA TATAAGAATT 
TCTCCAAGAA AAGCAAGAAG TGTTGCAAAT TCTATAAGAG GTAAAAATGT TTCAGAAGCG 
TTTACAATTC TTGAATTTTC ACCTAAAAAG GCTGCACGAA TCATAAAAAA TGTGTTAAAA 
TCAGCAGTGG CGAATGCAGT TAATAATCAT GGATTAAACG AAGAAAATCT ATATGTGTAT 
ACCTGTTATG TAAACGATGG TCCAAGAATG AAGAGGCTTT GGCCAAGGGG CAGAGGAAGT 
GCTGATATTA TCCAAAAAAG GATGTCGCAC ATAACAGTTA TAGTTAGGGA TAGAGAAGCC 
GAGAAGGCTG CAAATGAGGA AAAGAAATAG 

 

Protein sequence

MQVLIKRNGM KRSKFHRERK EKLASMPIYE ARAVAKYIRI SPRKARSVAN SIRGKNVSEA 
FTILEFSPKK AARIIKNVLK SAVANAVNNH GLNEENLYVY TCYVNDGPRM KRLWPRGRGS 
ADIIQKRMSH ITVIVRDREA EKAANEEKK