Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmel_0720 |
Symbol | |
ID | 5297880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermosipho melanesiensis BI429 |
Kingdom | Bacteria |
Replicon accession | NC_009616 |
Strand | - |
Start bp | 758672 |
End bp | 759223 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640769000 |
Product | LemA family protein |
Protein accession | YP_001305969 |
Protein GI | 150020615 |
COG category | [S] Function unknown |
COG ID | [COG1704] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.198372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTGGGT ATATAGTGTT AGCGATAGTT TTGCTTTTTG TGCTTTATCT CATAGGTACG TATAATAGTC TTGTAAGGTT AAAGAAATTG ATTGAAAATG CTTGGAGTCA AATTGATGTA CAGTTAAAAA GAAGGCACGA TTTAATTCCA AATCTCGTAA ATTCCGTAAA AGGTTATATG AAATATGAGC AAGAAACGTT GGAAAAGGTT ATGAAAGCCA GGGCAGCTGC AATATCTAGT AAGGATATTA ACAAAAGAAT GGAAAGCGAA AACGAATTAA CAGGACTTTT ATCTAGATTG TTAGCCGTTG TGGAAAATTA TCCTGAATTA AAGGCAAATG AAAATGTAAA TCAACTTATG AATGAGCTCA GGAAAACAGA AGATAAGATT GCATATGCAA GGCAGTTTTA TAACGATACG GTGATGAAAT ATAACACAAA GATATCTGTA TTTCCATCAA ATGTAGTTGC AAAGATGTTC AATTTTAAAG GAGAACCATT TTTCAAAATC AAAGAGACAG AAAAAGAAGT TCCAACAGTT TCATTTGAGT AA
|
Protein sequence | MIGYIVLAIV LLFVLYLIGT YNSLVRLKKL IENAWSQIDV QLKRRHDLIP NLVNSVKGYM KYEQETLEKV MKARAAAISS KDINKRMESE NELTGLLSRL LAVVENYPEL KANENVNQLM NELRKTEDKI AYARQFYNDT VMKYNTKISV FPSNVVAKMF NFKGEPFFKI KETEKEVPTV SFE
|
| |