Gene Tmel_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmel_0720 
Symbol 
ID5297880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermosipho melanesiensis BI429 
KingdomBacteria 
Replicon accessionNC_009616 
Strand
Start bp758672 
End bp759223 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content32% 
IMG OID640769000 
ProductLemA family protein 
Protein accessionYP_001305969 
Protein GI150020615 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.198372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGGT ATATAGTGTT AGCGATAGTT TTGCTTTTTG TGCTTTATCT CATAGGTACG 
TATAATAGTC TTGTAAGGTT AAAGAAATTG ATTGAAAATG CTTGGAGTCA AATTGATGTA
CAGTTAAAAA GAAGGCACGA TTTAATTCCA AATCTCGTAA ATTCCGTAAA AGGTTATATG
AAATATGAGC AAGAAACGTT GGAAAAGGTT ATGAAAGCCA GGGCAGCTGC AATATCTAGT
AAGGATATTA ACAAAAGAAT GGAAAGCGAA AACGAATTAA CAGGACTTTT ATCTAGATTG
TTAGCCGTTG TGGAAAATTA TCCTGAATTA AAGGCAAATG AAAATGTAAA TCAACTTATG
AATGAGCTCA GGAAAACAGA AGATAAGATT GCATATGCAA GGCAGTTTTA TAACGATACG
GTGATGAAAT ATAACACAAA GATATCTGTA TTTCCATCAA ATGTAGTTGC AAAGATGTTC
AATTTTAAAG GAGAACCATT TTTCAAAATC AAAGAGACAG AAAAAGAAGT TCCAACAGTT
TCATTTGAGT AA
 
Protein sequence
MIGYIVLAIV LLFVLYLIGT YNSLVRLKKL IENAWSQIDV QLKRRHDLIP NLVNSVKGYM 
KYEQETLEKV MKARAAAISS KDINKRMESE NELTGLLSRL LAVVENYPEL KANENVNQLM
NELRKTEDKI AYARQFYNDT VMKYNTKISV FPSNVVAKMF NFKGEPFFKI KETEKEVPTV
SFE