| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_0113 |
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| Symbol | |
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| ID | 5297329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 114774 |
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| End bp | 116468 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640768364 |
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| Product | carbon starvation protein CstA |
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| Protein accession | YP_001305375 |
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| Protein GI | 150020021 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.885531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAT TAATTTTAGC AATTTTGGCC TTCTTTGGTT ATTGGATAGC GTATAACACA
TATGGTAAGT GGATATCAAG AAAGATATTT AAGCTTAACG ACAAAAACAT TGTTCCATCA
AAAGAATTTG AGGATGGAGT CGATTTTGTT CCAACGAAAA AACATATTTT GTTGGGGCAT
CATTTTACTA CTATTGCTGG AACAGGTCCT ATTGTTGGGC CGGCTATAGG TGTAATTTGG
GGTTGGGTTC CGGCATTTAT ATGGGTATTT TTTGGTTCTA TATTTATGGG TGCAGTTCAC
GATTTTACAT CGTTAATTGT ATCTGCACGT CATCAGGGAA AAACAATAGG TGAGCTTACA
GGCGATTTAA TTAATGAAAG AACTGCAAAA ATATTTTTAA TTTTAATACA ATTTTTACTT
TGGATAGTTT TAGCTGTTTT TGGATTAATT GTTGCTTTAT TGTTTAATAT GTATCCTGAA
TCGGTTTTTC CTGTATGGAT GGAGATACCT ATTGCAATGT GGTTAAGCTA TATGGTTTAT
AACAAAGGAA AAAGTGATAA ATTGTATTCA ATCATTGCTA TTATTTTGAT GTATTTGACG
ATAGCTATAG GTGTTGTAAT GCCTATAAAA GGCATATCTG TAGTTAATTG GATGTATATT
TTAATGATAT ATGTATTCCT AGCTTCAACA TTACCGGTTC ATAAGTTGTT ACAGCCAAGG
GATTACATAA ACTCACATGA GTTATTAATT GCAATGGCGT TATTAGTAAT AGGAATTATA
GTAGGGCATC CCAAAATTGT TGCTCCTGCA TTTCAAACAG TTGCTGATGC CCCACCACTT
TTCCCAATTT TGTTTATAAC AATAGCATGT GGAGCTATTT CTGGGTTTCA TAGTCTAGCT
GCATCTGGTA CAACTGTAAA ACAACTTGAA AAAGAGACAG ATGCACTTCC TATTGGTTAT
GGTGGTATGA TTTTAGAAGG CGTTCTTGCA ACAATAGTGA TTATTGCTGT AACAGCTGGA
TTGGGAATGA ATGGTGGAGG TGTGGAGGCA TTTACATCGC ATTATGCTTC TTGGGCAGCA
GCAAGTGGTT TGAGTGCAAA ATTATCTGCG GTTATAAATG GTTCGGCTAA TTTAATGCAT
TCGTATGGTA TACCTCTTGA TTTGGCAAGA ACAATAATGG CGGTATTTAT TGTTTCATTT
GCTGGAACCA CTATGGATTC TTCAGCGAGA ATTCAAAGAT TTGCGTTACA AGAATTATTC
TCTAATAAGA AAAAAGAAGT TGTGGTAAAA CCATTAAAAA ATAGATATGT TTCTACAGCA
ATTGTAATTT TGGCGGCATT AGCATTGGCA TTATCCGCTG AAGGTGGTAG AGGTGCGTTA
ATATTGTGGC CTGTATTTGG AGCGTTGAAT CAATTGTTAG CTGGGTTGGC TCTGCTTATT
GGTACAGTTT ATTTGGCTAA AAAAGGCAAA CCCATTTGGA TTACGGGGCT TCCTATGTTA
TTTATGATGA TAATAACATT GTATGCAACA TTGATTAACT TAAAAAAGTT TATTTTGACC
CATAATGGAT TGTTAATATT TGTAACTATT GTGACATTTG TTATAGCGCT TTGGATAATT
ATTGAAGGAA TAGTTGCAAT AATAAAGGCG GGAAATGAAA GAAAAGAAAT AAAGACTGTT
GAAGAGGAAA TATAA
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| Protein sequence | MNSLILAILA FFGYWIAYNT YGKWISRKIF KLNDKNIVPS KEFEDGVDFV PTKKHILLGH
HFTTIAGTGP IVGPAIGVIW GWVPAFIWVF FGSIFMGAVH DFTSLIVSAR HQGKTIGELT
GDLINERTAK IFLILIQFLL WIVLAVFGLI VALLFNMYPE SVFPVWMEIP IAMWLSYMVY
NKGKSDKLYS IIAIILMYLT IAIGVVMPIK GISVVNWMYI LMIYVFLAST LPVHKLLQPR
DYINSHELLI AMALLVIGII VGHPKIVAPA FQTVADAPPL FPILFITIAC GAISGFHSLA
ASGTTVKQLE KETDALPIGY GGMILEGVLA TIVIIAVTAG LGMNGGGVEA FTSHYASWAA
ASGLSAKLSA VINGSANLMH SYGIPLDLAR TIMAVFIVSF AGTTMDSSAR IQRFALQELF
SNKKKEVVVK PLKNRYVSTA IVILAALALA LSAEGGRGAL ILWPVFGALN QLLAGLALLI
GTVYLAKKGK PIWITGLPML FMMIITLYAT LINLKKFILT HNGLLIFVTI VTFVIALWII
IEGIVAIIKA GNERKEIKTV EEEI
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