| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_2848 |
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| Symbol | |
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| ID | 7315285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011901 |
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| Strand | + |
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| Start bp | 2988278 |
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| End bp | 2990302 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643617748 |
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| Product | ATP-dependent OLD family endonuclease |
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| Protein accession | YP_002514908 |
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| Protein GI | 220936009 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.351188 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGC GTCATGCAAA GATCAAGAAC TTCCGGTTAC TCGCAGACGT GCAGCTTGCT
CTGGAGGATT TGACTACTGT TGTCGTGGGG CGAAACAACA GTGGCAAAAC TTCACTGTCC
GAGATCATAC GGCGACTACT AGCCGAAGGC AGCGCAGCAT TTCAACTCGA AGATTTCTCC
AGTGCCTGCT ACGACAGGTT CTGCACGGCA CTGGAAGCTC ATAATAATGG CCAAGATGAC
GATGTAGTCA GGGCTCTGAT TCCGTTCATC GAGTTGCGTT TGACGTTTGA ATATGACCCT
GCTCAGCCAC AGTTGGGGCC TCTCAGTCCA TTCGTTATCG ACCTCGACCC CGACTGTAAT
GAGGTACTCG CTGTAGTCCG CTACGAGTTG AAGGATGGAC AGCTCGCCCA ATTTTTCTCG
GGTCAGCCGG ATACCCCCCT GACCGATGAA ACGAGGATAG CTTTCTTTCG CTCGCTTCGA
GAACGTATTC CAACCAGCTT TGCCGTCAGG GTATGGGCGG AAGATCCGAA TGATGCGGAG
AACAATCGTC AGTTGCAGCC GAGTGCACTG AAGGCTCTGA TCAAAACCGG CTTCATCAAC
GCTCAAAGAG GCCTGGACGA CATAACATCC CGCGAGTCCG ATGTACTCGC CAAGACTGTT
GAACTCCTCT TTGCCACAGC TTCTTCATCT TCGGCAGATG AGGCTGACAA ACAGATTGCC
CAAGCGCTGA AAGAGGCCGT TCAGGACATT CAATCTCAGA TAGACAGCAG CTTCGGCGGC
CAACTGAACA ATCTGATACC GGCATTGAAG AACTTTGGAT ACCCAGGATT GGGAAATCAG
GAACTGCATA CCGAGACATT GCTTGATGTT CGCAAGCTGC TCTCCAATTT CACCAAGGTG
CGCTATGCCG GCTACAGCGG TGTGACTCTG CCGGAGTCCT ACAACGGGCT TGGAGCCAGA
AACCTCATTT TCATCCTTTT GCAGCTTGCG GGATTCTATA AATCGTTTCT GGCCGAACCA
AATTCTCCAG GGGTGCACCT GGTCTTCATT GAGGAACCCG AGGCTCATTT GCACCCTCAG
ATGCAGGAGG TTTTCATACG TCAGCTCGCG AAGACTGCTC AACTGCTGGT TGAAGGCACG
GAAAGTAAGA CGGCTTGGCC GGTCCAGTTC GTCGTTTCCA CGCACTCATC GCATATAGCC
AACGAGGCCG GATTTGAAAG TATCCGCTAT TTCCTCAGTG GCGAAGTACA AGGCGCAGCC
GCTGGCGTTC GGCAAACGAG GGTCAAGGAT CTACGCGAGG GGCTGGACGG CGTTTCCGAA
CCGGACAAGA AGTTTCTGCA TCAGTATATG ACGTTGACCC GCTGCGACCT GTTTTTTTCC
GACAAAGCGA TCCTAGTAGA AGGTTTGAGC GAGCGGCTCT TGCTCCCCGC GATCATCGAA
AAACTGGAAA CCGCAGAGCC AGATCGGCCA AAGCTATCAA GCCAGTACGT AACCACTATG
GAAGTCGGCG GAGCATATGC TCATCTTTTC TTCGGGCTCC TGCGCTTTCT TGAATTGCCA
ACCCTAATCC TTACCGATCT AGATTCGGTA GAAAAACCGG GCGGAAGCGC GTGCGAGGTC
CACAAGGGAA CCTACTCCAG CAACGCCTGC CTGAAAGCCT GGTTCTCCGA TGATAATCCA
TTCACCCTCA ATGGCCTCTT GACCAAGGAT GAATCCGAAA AGGCAAAGCA TGGCAACTGC
ATCGCCTATC AGTGCGCGGA GGAAGAGAAC GGGCCATGCG GTCGCACCTT TGAAGATGCT
TTCATTCTCG CGAACCGAGC ATTATTCGGC TTGAATGGAG CCACACGGGA AGAGCTTGAA
GCGGGAGCCA GAAGCCAAGC CAGTAAGATC AAGAAGTCCG AGTTTGCGCT GAAGTACGCA
ATAGAAGAAA AAGCCTGGAC GACCCCCAAG TACATTCTCG ATGGAATACG CTGGCTAGCG
GCTGGCATCG AGCCAGCCAT CCCTGACCCA ATCCACCCAA GTTAA
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| Protein sequence | MKLRHAKIKN FRLLADVQLA LEDLTTVVVG RNNSGKTSLS EIIRRLLAEG SAAFQLEDFS
SACYDRFCTA LEAHNNGQDD DVVRALIPFI ELRLTFEYDP AQPQLGPLSP FVIDLDPDCN
EVLAVVRYEL KDGQLAQFFS GQPDTPLTDE TRIAFFRSLR ERIPTSFAVR VWAEDPNDAE
NNRQLQPSAL KALIKTGFIN AQRGLDDITS RESDVLAKTV ELLFATASSS SADEADKQIA
QALKEAVQDI QSQIDSSFGG QLNNLIPALK NFGYPGLGNQ ELHTETLLDV RKLLSNFTKV
RYAGYSGVTL PESYNGLGAR NLIFILLQLA GFYKSFLAEP NSPGVHLVFI EEPEAHLHPQ
MQEVFIRQLA KTAQLLVEGT ESKTAWPVQF VVSTHSSHIA NEAGFESIRY FLSGEVQGAA
AGVRQTRVKD LREGLDGVSE PDKKFLHQYM TLTRCDLFFS DKAILVEGLS ERLLLPAIIE
KLETAEPDRP KLSSQYVTTM EVGGAYAHLF FGLLRFLELP TLILTDLDSV EKPGGSACEV
HKGTYSSNAC LKAWFSDDNP FTLNGLLTKD ESEKAKHGNC IAYQCAEEEN GPCGRTFEDA
FILANRALFG LNGATREELE AGARSQASKI KKSEFALKYA IEEKAWTTPK YILDGIRWLA
AGIEPAIPDP IHPS
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