| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_1945 |
|---|
| Symbol | |
|---|
| ID | 7316334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 2065518 |
|---|
| End bp | 2066810 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643616838 |
|---|
| Product | 6-aminohexanoate-dimer hydrolase |
|---|
| Protein accession | YP_002514013 |
|---|
| Protein GI | 220935114 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0642639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTGC ACGCGCAGGA GGCGTCACTT ACGGCACGTG AGTCCGACCC CCGCGTGATG
GGCTGGATGC AAGGCGTGCC GCCGGCGCCG GACAAGCGGA TCAGCGTCGC CGCCGGCGAC
TTCTTCGCGT TCCCCAAGTC CCGCTGGTCC GTCTGTCACA TGCGCGAGCT GTTTCCGACT
ATTGAAGTCA GCCGCGGCAT TGGTGCGCCG GTACCGCTGG ACTACGTGCC GCATCACGAG
TTCGCCGACA TCCGTGCCGA GATCGACGCG CTGACCTTTA CGCCGATGGA TGGCGATGAA
GAGATGACCT GGGCTGAGTC GCTTGCTGCG AACTATACCG ACGGCATACT GATCCTGCAC
AAGGGGCAGG TCGTCTACGA ATGGTATTCG GGTTGCCTGA GCGAGACGGG CCAGCATGCC
ATGATGTCGA TGACCAAGTC GCTGGTCGGC CTGCTGGCAG AGATCCTGGT CGCCGAGGGC
CGGTTGGATG ACGACGCACC GGTGACAGAT TATGTGCCCG AACTGGCCGA CACGGCCTTT
GGTTCCGCCA GTGTTCGGCA GGTCATGGAC ATGACCACGG CGCTGGCCTT CGATGAGAAC
TACGACGACC CCAATGCCGA TATCTGGGCC TATTCCGCCG CCGGGAACCC GCTACCCAAG
CCACCGGGTT ACGACGGCCC GATCGGCTAC ATCGAGTATC TGCAAACCGT CGAGCGGGAT
GGCAGACACG GCGTGGCCTT CGGCTACAAG ACCATCAATA CCGACGTGCT GGCCTGGATC
GTCGCGCGCG TGACCGGGAT GACCTATACG CAGGCGTTAT CCGACATGCT CTGGAGTCGC
ATGGGTGCCG AGCAGAGTGC CTATATTACT GGCGACGCCG TCGGCACGCC GTTCGCAGGG
GGCGGTATGT CGGCAGGGCT GCGCGACCTG GGCCGATTGG GTCTGCTGTT GCTCAATGAG
GGTGTGATCA ATGGCGAGCG ATTGTTCCCG GCCGATGTGG TGGAGAGCAT TCGTGCGGGG
GGCAGCCGCA GGGCCTTTGC CAGGGCCGGC TTCGATACGC TGGCCGGTGG CAGCTACCGT
TCTATGTTCT GGGTGTTCCA CAACGACAAC GGCGCCTTTG CCGCACGCGG CGTTTACGGT
CAGACGATCT ACGTCGATCC GGCCGCCGAG ATGGTGTTGG TGCGCCTTGC TTCCTACCCC
AAGCCGAAGA ACGCGCTTAT CGATCCAACA TCGCTGCCAG CCTACCAGGC GGTAGCAGAC
TATCTCATGT CAAGTCGCTC CAAGTACCCG TGA
|
|---|
| Protein sequence | MSVHAQEASL TARESDPRVM GWMQGVPPAP DKRISVAAGD FFAFPKSRWS VCHMRELFPT
IEVSRGIGAP VPLDYVPHHE FADIRAEIDA LTFTPMDGDE EMTWAESLAA NYTDGILILH
KGQVVYEWYS GCLSETGQHA MMSMTKSLVG LLAEILVAEG RLDDDAPVTD YVPELADTAF
GSASVRQVMD MTTALAFDEN YDDPNADIWA YSAAGNPLPK PPGYDGPIGY IEYLQTVERD
GRHGVAFGYK TINTDVLAWI VARVTGMTYT QALSDMLWSR MGAEQSAYIT GDAVGTPFAG
GGMSAGLRDL GRLGLLLLNE GVINGERLFP ADVVESIRAG GSRRAFARAG FDTLAGGSYR
SMFWVFHNDN GAFAARGVYG QTIYVDPAAE MVLVRLASYP KPKNALIDPT SLPAYQAVAD
YLMSSRSKYP
|
|---|
| |