| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tgr7_0453 |
|---|
| Symbol | |
|---|
| ID | 7316539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thioalkalivibrio sp. HL-EbGR7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011901 |
|---|
| Strand | - |
|---|
| Start bp | 482377 |
|---|
| End bp | 483420 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643615337 |
|---|
| Product | transport system ATP-binding protein |
|---|
| Protein accession | YP_002512538 |
|---|
| Protein GI | 220933639 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.875703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACCGC TGCTTGAAGT CGACAACGTG GACGTGGCCT ATGGCAGCAC CGCCGTGGTG
CACCAGGTCA ACCTGGAACT GCGCAAGGGC CTGATCGGCT GCCTGCTGGG CCCGAGCGGT
TGCGGCAAGA CCACCCTGCT GCGCGCCATC GCAGGCTTCG AGCCCGTGGC CGCCGGCGAG
ATCCGCCTCA ATGGCGAGCC GGTCAGCCGC CCCGGCTGGA CCACGCCCCC GGAACGCCGC
CAGGTGGGCA TGGTGTTCCA GGACTTTGCC CTGTTTCCAC ACCTGAACGT GGCCGAGAAC
ATCGCCTTCG GCATCCGTCA CCTGCCCGCC CGCGACCGGG ACACCCGGGT GCGGGAACTG
CTGGAACTGG TGGGCCTGCC CAGCTATGGC AGGAGCTACC CCCATGCCCT CTCCGGCGGC
CAGCAGCAGC GCATCGCGCT GGCCCGGGCC ATGGCGCCGC GCCCGCGCCT GCTGCTGCTG
GACGAACCCT TCTCGAGCAT GGACGTGGAA CTGCGCGAAG ATCTGGCCCG GGAGGTGCGC
CGCATCCTCA AACAGGAGCA GATCACCGCC ATCCTGGTGA CCCACGACCA GATGGAGGCC
TTCGCCATGG CCGACCGCAT CGGCGTGGTC AACGCCGGGC GCATCCTGCA GTGGGACACC
GCCTACAACC TCTACCACCG CCCCGCCGAG CGCTTCGTGG CCGACTTCAT CGGCCAGGGC
AAGCTGCTGC CCGGCACGGT GCTCAACGAT CACCAGGTGG AGACCGAACT GGGCATCATC
ACCGGCCTGG TGCCCGAGGG CTGCGGCGTG GGCGCCCCGG TGGACGTGCT GGTGCGCCCC
GACGACATCC GCCCCGACGA CCAGAGCCAC ATCAGCGGCG AGGTGCTGGA CAAGGCCTTC
CGCGGCGCCA GCTTCCTGTA CACCCTGCGG CTCGCGAGCG GCGGCAAGGT GCTGTGCTTC
GCCCCCAGCC ACGACAACTT CGCCGTAGGC GAGCGCATCG GCCTGAAACT GGCCTTCAAC
CACCTGGTGA TATTTCCCCG CTGA
|
|---|
| Protein sequence | MTPLLEVDNV DVAYGSTAVV HQVNLELRKG LIGCLLGPSG CGKTTLLRAI AGFEPVAAGE
IRLNGEPVSR PGWTTPPERR QVGMVFQDFA LFPHLNVAEN IAFGIRHLPA RDRDTRVREL
LELVGLPSYG RSYPHALSGG QQQRIALARA MAPRPRLLLL DEPFSSMDVE LREDLAREVR
RILKQEQITA ILVTHDQMEA FAMADRIGVV NAGRILQWDT AYNLYHRPAE RFVADFIGQG
KLLPGTVLND HQVETELGII TGLVPEGCGV GAPVDVLVRP DDIRPDDQSH ISGEVLDKAF
RGASFLYTLR LASGGKVLCF APSHDNFAVG ERIGLKLAFN HLVIFPR
|
|---|
| |