Gene Tfu_2627 details

Gene Information

• Locus tag: Tfu_2627
• Symbol: rplO
• ID: 3580641
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: -
• Start bp: 3099155
• End bp: 3099604
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637686346
• Product: 50S ribosomal protein L15
• Protein accession: YP_290683
• Protein GI: 72163026
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 0.153317
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGAGT TGCTCAAGCT CCACCACCTG CGTCCGGCCC CCGGCTCCAA CAAGGCCAAG 
ATCCGCAAGG GCCGCGGTGA GGCGTCGAAG GGTAAGACCG CCGGCCGCGG TACCAAGGGC 
ACCAAGGCTC GGAGCACGGT GCCGGCCGGT TTCGAGGGTG GCCAGATGCC CCTCATCCGC 
CGGATTCCGA AGCTCAAGGG CTTCAGTAAC GCCAAATTCA AGACCGTGTA CCAGGTGGTG 
AACCTGGACA AGCTGAGCAA GCTGTACCCC GAGGGCGGCG AGGTCACCAT TGAGGACCTG 
GTCGCCAAGG GTGCGGTGCG CAAGAATCAG CCGGTCAAGG TGCTGGGCAC TGGAGAGATT 
TCGGTTCCGG TGCGGGTGAG CGCGAACGCG TTCTCCAGCT CTGCCAAGGA GAAGATCCTT 
GCGGCTGGTG GCAGCGTCAC CGAGATCTAG 

 

Protein sequence

MSELLKLHHL RPAPGSNKAK IRKGRGEASK GKTAGRGTKG TKARSTVPAG FEGGQMPLIR 
RIPKLKGFSN AKFKTVYQVV NLDKLSKLYP EGGEVTIEDL VAKGAVRKNQ PVKVLGTGEI 
SVPVRVSANA FSSSAKEKIL AAGGSVTEI