Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1887 |
Symbol | |
ID | 3579470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2210686 |
End bp | 2211987 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637685579 |
Product | hypothetical protein |
Protein accession | YP_289943 |
Protein GI | 72162286 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.321613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGTCAA TGATTTGTCT ACCCACTAAG TGGGAAAAGT TTCGTGAGTC GTATCACAGC GTCGAAGGCG GCTCCGAATT ACGGTTCGTC AACGGAACAG CGAGGAAACC ACGACGATCC CCGCAGGGCA TACGGCAAAA CGGACATTTC AGGGCTATGT TCGAAGGTGT GCGACCTCAA TGGGCGAACC TCGAGCGGCT CCAGGAAGCG GTCAGAACCT GGCCTGACCG CCACCCCCGC TCCGGCGCCG CAGCCATGCT GGTCGCCCGC ACGGTGCGGT CCGCGCTGCG AGTCCGCATC ATCGGGTTGG CCGCCGAGTC CGCGTTCTTC TCCCTCCTGT CCCTGCCGTC CCTCCTCCTC GGCCTCGTCG GCACCCTGGG CCACCTCAGC TCGGTGCTCG GCCACCAGAC AGTAGTGGAG ATCCGCGCCT GGATGCTGGA CCTGGCCGCC ACCGTCCTGA CCGCTGAAGC CGTGCAGACC ACCGTCGAAC CCCTTGTCGA CGACTTTCTC GGTGGCGCCC ACGGCGGGGT GCTCTCGCTC ACCTTCCTCG TCTCACTCTG GTCCGGCTCC CGCGCCATGA GCGTGTTCAT CGAGGCCATC ACCATCGCCT ACGGGCTGGA AGGCATGCGC GGCTACCTGC GCCGCCGCCT GCTCGCGTTC GTTGCTTACC TCGGGGCGCT GCTGTTCGCG CTGGTCGTGC TCCCGGCTGT GGTCGCGGGC CCGGACGCAC TCCGCGCCCT GCTCCCCGCA GCCGACACCT ACCTCCACCT GGGCTACTGG CCGCTGGTGG GACTGCTCAG CCTCGGCAGC ATCGTGGCCC TCTACACCTT GAGCGTCCCG GTGCGCACCT CCCTGGTCCG CCAACTGCCG GGAGCGATCG CTGCCGTCCT CATCCTGCTC TGCGGCACCG TAGGGTTGCG GCTCTACCTG GAAGCCTCCT TCGGACAGGT GAACCTCTAC GGTCCGCTCA CCGCGCCCAT CATCATCGTG ATCTGGCTGT ACCTGACCGC GCTCGCCGTG CTGGCCGGAT CCTCCCTCAA CGCCGAGATC GACGCCATGT GGCCGGTCGC GGAAACCGCG CGGGCCCGGG CCGAGCTCGC CGCCCGCCGC CAGGCCAGCG CGGTCCGCCT CGCAGAACGC CACGAGCAGG CCCTGCAGCG GATCGCCCAG GCGCGCGAGC AGGACACGAG GGTTGCTGAA AGCCGGGCGG GGAAAAACTC CGAAGTGCAG TCCTCCCCCC GGCCCGATCG CGCTGCCGCA GCCCGCCGGC GGCCTGCCCG CCCGCGCCGG CGCCGCCGCT GA
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Protein sequence | MPSMICLPTK WEKFRESYHS VEGGSELRFV NGTARKPRRS PQGIRQNGHF RAMFEGVRPQ WANLERLQEA VRTWPDRHPR SGAAAMLVAR TVRSALRVRI IGLAAESAFF SLLSLPSLLL GLVGTLGHLS SVLGHQTVVE IRAWMLDLAA TVLTAEAVQT TVEPLVDDFL GGAHGGVLSL TFLVSLWSGS RAMSVFIEAI TIAYGLEGMR GYLRRRLLAF VAYLGALLFA LVVLPAVVAG PDALRALLPA ADTYLHLGYW PLVGLLSLGS IVALYTLSVP VRTSLVRQLP GAIAAVLILL CGTVGLRLYL EASFGQVNLY GPLTAPIIIV IWLYLTALAV LAGSSLNAEI DAMWPVAETA RARAELAARR QASAVRLAER HEQALQRIAQ AREQDTRVAE SRAGKNSEVQ SSPRPDRAAA ARRRPARPRR RRR
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