| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1609 |
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| Symbol | |
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| ID | 3581096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 1859713 |
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| End bp | 1861386 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637685303 |
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| Product | ABC-type sugar transport system periplasmic component |
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| Protein accession | YP_289667 |
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| Protein GI | 72162010 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.051709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACACT CCCACCCCTC CCCCGGCCAC GGGCCGAGCC GGCGCCGCTT CCTCGGGTTG
ACCGGTGCTG CTGCCGCACT CGTGGCGGGC AGCGGCCTGC TGTCGGCCTG CGCCCCCAAG
GGGCCGCGTC CCGGCAGCAG CGGTTCCGCG GCCAACCTCG ACAAACTGGA CGCGCTCGTC
CCCGACTACA TTCCGTTCCA AGCGGTGGAG CCCGACATTC CCGGCACGCA CGGGGCCCCG
CCCGGTTTCA CCTCCTACCC CACCGAGCTG GTGCAGGCGG TGGACGGCAC CCCCGGCAAG
GGCGGCAGCT ACAAGGCGAT GGCCCCGCTG TGGGGGCCTA TCCCGCCGGG GTTAGGAGAG
AACTCTTTCT ACGACTTCGT CAACAGCAAA CTGGGGACCA CGATCGACTT CCAGTTCCAG
GACGGCAACA CGATCATCGA CAAGATGAAC GCTGTGATCG CTGCTGGGGA CGTCGTCGAC
ATCACGATGA TCCCCGACTG GGCGATCAAC CTCATCCCCG ACTTCAACGA GGCTGCGCCC
CAGCTTTTCG AAGACCTCAC CCCGTACCTG GCCGGATCAG CGGTGGAACC GTATCCGATG
CTGGCAAGCC TGCCCACCAA CGCGTGGAAG TGGGGGGTGT TCAGCGACCG GCTCTACGGG
GTGCCGTGGC CCACCGATCC GCTGTCGGAG TGGATCTTCT ACCGCAAGGA CCTGTTCGAC
AAGCACGGCT GGGGTCTGCC CACCACTGCT GAGGAGCTGT TCGAACTCGG TGAGGAGATC
AACGACCCGC GCAACAACCG GTGGGCGTTC GGCGACTTCT ACCGGGTGGC CCGCCAGATT
TTCCGGGCGC CGCGGGAGTG GCGGTATGAG GACGGAAAAC TTGTCCACCG CTATGAGACT
CCCGAGTTCG AGGAGGCTGT GGCGTTCATG CGCCGCGTCT ACGACGCTGG GCTCGTCCAC
CCGGATATCG CGGCGGGGAC CGGAGCGAAC TCCAAGGAGC TGTTCAACAG CGGCAAGATC
GTCATCACCC AGGACGGGTT TGGCGCGTGG ACCGAGGCCT ACCAGGCGAT CCTGCCGCAG
AACCCCGACT TCCGTATGGA CTTGGTGCCG GTGTTCGCGC ACGACGGCGG CACCCCGTCC
CTGCACGGCA ACGACCCGTC CAGCCAGAGC GTGTTCATCA AGAAGGGCTT GGGCGAGGAG
AAGGTGACCG AGATCCTCGC GGTGCTCAAC TACTGTGCGG CCCCGTTCGG CACGGTCGAG
TACATGGTGT ACCGCTACGG CGAGGAGGGG CGGCACTACG AGCTGAACGA CGACGGTGCC
CCCGAGCTGA CCGAGCTCGG GCAGAAAGAA GTGTCCAACG GCTACCTGTT CATCAGCGGC
CGCAACAACG CGATCGCGGA AAGCGAGTAC CCGGACTACG TGGAGTCTTT CACTGCCTGG
TTCAACGAGG CCGCGCAGTA CACCGAGGAA AACCCGTTCG AGGGGATCCG GATCCAGCGG
CCGTCGGCGT ATGTCAGTGC TGAGCAGCCC ACGGAAGACA AGATCACGGA CATTCTGCGG
GGCCGCCGCG AGGTGAGTGA GCTCAGCGAG GTCGTCGCCC AGTGGCGGCG GGACGGCGGT
GATGCGGCAC GCGACTTCTA CGGCGACGTC CTCGCCGAGC ACGGCCGTGC TTGA
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| Protein sequence | MRHSHPSPGH GPSRRRFLGL TGAAAALVAG SGLLSACAPK GPRPGSSGSA ANLDKLDALV
PDYIPFQAVE PDIPGTHGAP PGFTSYPTEL VQAVDGTPGK GGSYKAMAPL WGPIPPGLGE
NSFYDFVNSK LGTTIDFQFQ DGNTIIDKMN AVIAAGDVVD ITMIPDWAIN LIPDFNEAAP
QLFEDLTPYL AGSAVEPYPM LASLPTNAWK WGVFSDRLYG VPWPTDPLSE WIFYRKDLFD
KHGWGLPTTA EELFELGEEI NDPRNNRWAF GDFYRVARQI FRAPREWRYE DGKLVHRYET
PEFEEAVAFM RRVYDAGLVH PDIAAGTGAN SKELFNSGKI VITQDGFGAW TEAYQAILPQ
NPDFRMDLVP VFAHDGGTPS LHGNDPSSQS VFIKKGLGEE KVTEILAVLN YCAAPFGTVE
YMVYRYGEEG RHYELNDDGA PELTELGQKE VSNGYLFISG RNNAIAESEY PDYVESFTAW
FNEAAQYTEE NPFEGIRIQR PSAYVSAEQP TEDKITDILR GRREVSELSE VVAQWRRDGG
DAARDFYGDV LAEHGRA
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