| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0264 |
|---|
| Symbol | |
|---|
| ID | 3579920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 294998 |
|---|
| End bp | 295438 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637683948 |
|---|
| Product | helix-hairpin-helix DNA-binding motif-containing protein |
|---|
| Protein accession | YP_288325 |
|---|
| Protein GI | 72160668 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.269806 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACA GGGTCAACCC CCACTGGCTG AAGTTAGGTT CTCAAATCCG ACTTCTCAGG
GAGGCGCAAG GACTTTCTCA AGCCCAGCTC AGTCAAGCGC TCAACATCTC ACAAGCGATG
CTCAGCGCTG TGGAGCGAGG AATCCGGAAC TGCAAACCGG ATCTCGCAGC ACAAATCGAC
CACGTCCTTA ACACAGGCGG GAAGGTCAGA AGGCTGTGGG AGATCAACCA CACCAACAGC
GCCTTCCCGC ACTGGTTCCG GGACATCGTG CAGTTGCAGC GTGCCGCTTC CGAGATCTGG
GAGTTCCAGA TTGCTTTGAT CCCCGGCCTG CTTCAGACCA AGGAGTATGC GCGCACGCGG
ATCCAGCTCT CCCAGCCCAC TGCCAGCGTC GAGGAGATCG ACCAGAAAGT CAGAGCTCGT
CTGGACCGTC AGTCCACCTG A
|
|---|
| Protein sequence | MADRVNPHWL KLGSQIRLLR EAQGLSQAQL SQALNISQAM LSAVERGIRN CKPDLAAQID
HVLNTGGKVR RLWEINHTNS AFPHWFRDIV QLQRAASEIW EFQIALIPGL LQTKEYARTR
IQLSQPTASV EEIDQKVRAR LDRQST
|
|---|
| |