Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_4718 |
Symbol | |
ID | 4246372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | + |
Start bp | 7239247 |
End bp | 7242270 |
Gene Length | 3024 bp |
Protein Length | 1007 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 638109578 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_724154 |
Protein GI | 113478093 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.87534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATGA CATCTACAGA AAATTGGCGA AATCCTTATA ATATTGGTGG TTCTATTGAT GAACCAAAAT TGTTTTTTGG TCGAGAAAGT TTGTTTCGTG TTATTGAAGA TAATTTGAAT AATAATCAAC GAATTATTCT TCTACATGGT CAAAGACGTA TAGGTAAATC TTCTGTATTA AAGCAAATTC CTAAACAGGT ACGTTTGGAT AATCAATTTG TTTTTATTCT GTTAGATTTT CAAGATAAAT TCCAATGGTC TCTCGATCAA ATTTTCCATT ATATTATCCA AAAAGTTGCT CAAGAAATTT TTGAGAATTC GGAAGATACC ACACATAGTA TTGATTTAGT TTCACTTGAA GGCTTAGAAA AAGATCCCAA TGAATTCAGA GAATTATTGC ATTCGATAGT CCAAAAATTG GGGAGTAAAA ATTTAGTATT ATTACTGGAT GAGTTTGATG TATTTGCAGG CAACAATAAT GACTCAACAT TTGAAGATTT CTTTGGATAC TTAAAGACAA TTGTGTCTGA GGAAAAGCAA CTTTTTATTA TTCCTGTTGT GGGAAGGCGA CTAGATGATA TGCCGAAACT TCTAAGATTG TTTAAGGGTG CGCCTAAGCA GGAAATAGGA TTACTAGAAA GAGTAAGTAC GAAAAGGTTG ATTACACAAC CTGCTAGAAA ATTTCTGCAA TACAATGAGG GAGCAATAAA CGAAATTTTT CGACTTTCAG CGGGCCATCC TTACTTTACA CAAGCTATAT GTTACGCTGT GTTTGTACAA GCACGGGAAG AGGAAAAAAG TGAGATTTTG GAGAGTGATG TAGGCAGGGC GATCGAGAAG GCTATGGAGT TAAGCGAAGG AGGGTTGGAT TGGTTTCGGG GAGGTTTGCT GAGACTAGAA AGAGTTTTAT TTTCAGCAGT AGCAGCAGCT CAAGAGAGTG TTAAGCAAAT TCAGTCACCT CCGGAAAACT TCTTCAATTT GCTTGAAAGA TATGGAGTTC AAATAAAACA ACTACTTCGT GAGCAACTAC TTCAGGCACA ACAAGCTTTG AGTGAAAATG ATTTTTTAGA TCCATCTGGG TACAAAGTTA CAGTTGAGTT TGTTCGTCTT TGGTTAATCA AATATTATCC ACTACGCTCA GAAATATGGG AATTGGAGAA GCTTGATGAT GAAGCTAATA ATTATTACGA AGGAGCTGAT AAATGGCGGA TACGAGGGGA TATAGATCGT GAGTTAGAGC ATTATAATAT GGCTTTAGAA CTTAATCCTA ACCACTTTAG TGCTTTATTC CGGTTGGCTG CACGATACAA AAAAAAGCAA AGATTTCAGG CAGCATTAGA ACTATACGAG AGAGTTTATA AAATTCATTC ACAACGTGGG AAAGAGGAAT ACATAGAGTT ATTGTTTGGT TATGGTGATC ATTTAATTCA AGAAAATGGT TCTATAGAGA CAAAGTTAAG TGCAGTTAAA AAGCTATACG AAACGGTCCT AAAAATCGAA CCATACAATA TGGAAGCTCA AGAGAAACTT AAAGATATTA AAGACAAGGA AAATGCTCTA TTTTCTGTCA GTAAGAAGTC TAAAACAATT CCAATTCGTA ATGTATTTTT GACAGCAGCT TTAGCAGCTC CTCTGCTGAT TGGAATAGGA ATATTTTGGG GATTAAAAAC TAAACAAGAT CCAGATTTTA TACTCGGAAA ATCAGAGCTG GATCAGCTAG AAATAGAAAG ATTTAGCAGT GGCGAAAAAA GAATGTTTGA TTGGTATAAC AACACAGATG ATAATATTAA GTTTATAAGT TGTAATGTAA AATTTAAAGT TTCTAATTAC AAAGAAGCAG TTAGTTGTTT TCAAGAATTT GTAAATTCTA ATCGCAACGA CCCAGAGCCA TTGATTTACT ATAACAATTC TCTAGCTCGC GAGAATAATA ATAATCCTTT AAAAATAGCT GTAGTTGTAC CAGCAGATAA GAACAGTCAA AGAGCTAAAG CAATTTTGCG AGGTGTTGCT CAGGCACAAA ATGAATACAA TAAAAACTAC TATTTCTCAG GAAATAGTAG ATTACTGGAA ATTATTATTG TCAATGACAG TAATGATGAT GAAATATCTC CAAAAGTAGC TCAAGGAATA GTCAGAGATA AAGAAATTTT AGGGGTAATA GGACATAATT ATAGTGATGC TACTAAGGCA GCATTAGAAG TATATCAAAA AGAAAAATTG GCAGTTATTT CTTCTACTAG CACAAGTATA GAATTAAAAG GTGATACTTT TTTTAGAACG GTGATTGATG ACTCTGTAGC AAGTAAAAAG CTAGCTGAAT ATGTCAAATT TCGATCTATA GAAAAGATTG TGATTTTTTA TAACAAAGAA AGTTCATTTA GTAAAAGTAT CAATGGTTTT TTTGATTTTT ACTTAACAAC TTTGAAGCCT GACATAAAGG TTAAAAGTAT AGATTTGAAA CAATCGTCTT TTGATCTCAA TAAGGAAGTT CGGGTGGCAG CCAATAACCA AGTTGAAGCT GGAGCGCTAT TTGCAAACAT AGGAACAATT GACTTAGCAA TAGAGGTTGC TAAAGCTAAT TTTAAATTGC CAGAAAGCCA AAGATTAAAA TTAATTGCTG GTGATAGTTT TTATAATTGT GATATCTTAG ACAAAGGTGG GGAACCACTT AAAGGTTTGA TTTTATCAAT ACCGTGGCAT AAACAATTAG ATACAGCAAA AGAGTTTGTA GCTAGAGCAA AAGAGCAGTG GGGAGAGGAG GAGGAGGTTG GCTGGCGCAC TGCTACTAGT TATGATGCAA CTAAGGCTTT TATTTCTGCG TTATCTAATT CTGGCGATGA TCCCACCAGG TCTAAAGTGT TGGAAAAACT TAAAGAGGTA AATGTTCCAG CTAATGAAAC CTCTGGAGAA CATCTTAAAT TTAATCCAGA AGGAGAAATT GCTGGTCAAG CAGTTCTTGT GGAAGTTGTG GAGTCTCAAA ACCCAGCTTG CTCTAGTTTA GATTTTAGTT TAATAAAAGA GTAG
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Protein sequence | MNMTSTENWR NPYNIGGSID EPKLFFGRES LFRVIEDNLN NNQRIILLHG QRRIGKSSVL KQIPKQVRLD NQFVFILLDF QDKFQWSLDQ IFHYIIQKVA QEIFENSEDT THSIDLVSLE GLEKDPNEFR ELLHSIVQKL GSKNLVLLLD EFDVFAGNNN DSTFEDFFGY LKTIVSEEKQ LFIIPVVGRR LDDMPKLLRL FKGAPKQEIG LLERVSTKRL ITQPARKFLQ YNEGAINEIF RLSAGHPYFT QAICYAVFVQ AREEEKSEIL ESDVGRAIEK AMELSEGGLD WFRGGLLRLE RVLFSAVAAA QESVKQIQSP PENFFNLLER YGVQIKQLLR EQLLQAQQAL SENDFLDPSG YKVTVEFVRL WLIKYYPLRS EIWELEKLDD EANNYYEGAD KWRIRGDIDR ELEHYNMALE LNPNHFSALF RLAARYKKKQ RFQAALELYE RVYKIHSQRG KEEYIELLFG YGDHLIQENG SIETKLSAVK KLYETVLKIE PYNMEAQEKL KDIKDKENAL FSVSKKSKTI PIRNVFLTAA LAAPLLIGIG IFWGLKTKQD PDFILGKSEL DQLEIERFSS GEKRMFDWYN NTDDNIKFIS CNVKFKVSNY KEAVSCFQEF VNSNRNDPEP LIYYNNSLAR ENNNNPLKIA VVVPADKNSQ RAKAILRGVA QAQNEYNKNY YFSGNSRLLE IIIVNDSNDD EISPKVAQGI VRDKEILGVI GHNYSDATKA ALEVYQKEKL AVISSTSTSI ELKGDTFFRT VIDDSVASKK LAEYVKFRSI EKIVIFYNKE SSFSKSINGF FDFYLTTLKP DIKVKSIDLK QSSFDLNKEV RVAANNQVEA GALFANIGTI DLAIEVAKAN FKLPESQRLK LIAGDSFYNC DILDKGGEPL KGLILSIPWH KQLDTAKEFV ARAKEQWGEE EEVGWRTATS YDATKAFISA LSNSGDDPTR SKVLEKLKEV NVPANETSGE HLKFNPEGEI AGQAVLVEVV ESQNPACSSL DFSLIKE
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