| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_3174 |
|---|
| Symbol | |
|---|
| ID | 4243846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 4847767 |
|---|
| End bp | 4848852 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638108183 |
|---|
| Product | L-alanine dehydrogenase |
|---|
| Protein accession | YP_722774 |
|---|
| Protein GI | 113476713 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0686] Alanine dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.18262 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.22537 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG GTATTCCAAA AGAAATTAAG GATCAGGAGT TTCGTGTAGG ATTAACCCCT
GCAAGTGTTA AGGTCTGTAC TGAAGCAGGT AATGAAGTAT TTATAGAGAC AGAAGCTGGT
TGGGGCGCAG GTTTTAGTGA TAGTGACTAT CTTAATGCAG GCGGGCATAT CTTATCAGAT
ACCAGGGACG TTTGGAAGTG TGACATGATA GTTAAGGTTA AGGAACCTCT ATCCTCAGAG
TATGAATTTC TCAAATCAGA ACAACTGCTA TTTACTTATT TACATTTAGC TGCGGATCGG
AAGTTAACTA AAAAATTAAT TGAAAGTGGC GTCACGGCCA TCGCCTATGA AACGGTAGAG
TTATCTGACC AAAGGCTACC TTTATTAACT CCTATGAGTA TAATAGCTGG TCGTTTGTCT
GTGCAGTTTG GGGCAAGATT TTTGGAAAGA CAACAAGGTG GTAGAGGTGT TCTCTTGGGT
GGGGTCCCTG GTGTTACCCC TGGCAAAGTT GTAATTCTGG GAGGAGGAAT AGTTGGTACA
GAAGCAGCTA AAATTGCTGT TGGCTTGGGT GCAAAAGTCA AAATTTTGGA TATTAATTTG
GAAAGGTTGG CTTATTTAGA GACTGTATTT GGCTCAAGGT TAGAGTTACT ATATAGTAGT
TCCTCTGCTA TAGAAGCAGC AGTCGCAGAT TGTGATTTAC TTGTAGGGGC AGTTTTAGTT
CCTGGCCGTC GTTCTCCAGT TTTAGTTCCC AAAAGTTTGG TGGAGCAGAT GCATTCTGGA
TCTGTAATTA TCGATGTTGC TGTGGATCAA GGTGGTTGTG TGGAAACTCT ACGTCCTACT
TCTCATACAA ATCCTATCTA TCAGGAATTA GGTGTCGTAC ATTATGGAGT ACCTAATATG
CCTGGAGCAG TTCCCTGGAC AGCTACTCAA GCTTTAAATA ATAGTACTTT ACCTTATGTA
TTGCAGTTAG CTAACTATGG TAGTAAAGCT TTAGATATGA ATCCAGGGTT GGCTAAGGGA
TTGAATGTTA AAAACCATGT TTTGGTTCAC CCTGCTCTCC GAGAAGTATT TCCTGATTTA
AACTAG
|
|---|
| Protein sequence | MKIGIPKEIK DQEFRVGLTP ASVKVCTEAG NEVFIETEAG WGAGFSDSDY LNAGGHILSD
TRDVWKCDMI VKVKEPLSSE YEFLKSEQLL FTYLHLAADR KLTKKLIESG VTAIAYETVE
LSDQRLPLLT PMSIIAGRLS VQFGARFLER QQGGRGVLLG GVPGVTPGKV VILGGGIVGT
EAAKIAVGLG AKVKILDINL ERLAYLETVF GSRLELLYSS SSAIEAAVAD CDLLVGAVLV
PGRRSPVLVP KSLVEQMHSG SVIIDVAVDQ GGCVETLRPT SHTNPIYQEL GVVHYGVPNM
PGAVPWTATQ ALNNSTLPYV LQLANYGSKA LDMNPGLAKG LNVKNHVLVH PALREVFPDL
N
|
|---|
| |