| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_1747 |
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| Symbol | |
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| ID | 4245404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 2659750 |
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| End bp | 2660862 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638106871 |
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| Product | twitching motility protein |
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| Protein accession | YP_721480 |
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| Protein GI | 113475419 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.555642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTTGA TGATTGAGGA TGTTTTAGAA TCTTTAGTTG AACAAGGTGG TTCTGATGTT
CATATTCAAG CAAGAGCACC AATTTTTTTC CGTATTAACG GTCAGTTGAC TGCTCAAACT
CAGTTTGGGG AAAATATGGA ACCAATGGTA GTACAAGCTC TGATTTTCCA AATGCTCAAT
AATATGCAAC GGAAACATTT AGAACAAAAC TGGGAGCTTG ATAGCGCTTA TGGTGTTAAG
GGTTTGGCTC GTTTCCGTCT AAATGTGTAT CGGGAGCGGG GTAGTTGGGC TGCTTGTATG
CGTGCTTTGG CTTCTAAAAT TCCTAATGCA GATAAATTAG GGATTCCCAT GATTTTACGG
GAAATGACGG AGCGACCCAG GGGATTGTTT TTGGTGACGG GGCAAACAGG TTCTGGGAAG
ACAACTACGA TGGCAGCTTT AATAGATTTG ATTAACCGTA CTCGTACTGA ACATATTTTG
ACTGTGGAAG ACCCCATAGA ATATGTGTTT CCCAATCAAA AAAGTTTGTT TCATCAACGA
CAAAAAGGTG AAGATACGAA AAGTTTTGCT AATGCTCTGA AGGGAGCGTT ACGTCAAGAC
CCTGATATTA TTCTGGTTGG GGAAATGCGG GATTTGGAAA CTATTGGTTT GGCTTGTAGT
GCGGCAGAAA CAGGTCACTT GGTTTTTGGG ACTCTCCACA CTAACTCAGC TGCGGGTACG
GTAGACCGGA TGTTGGATGT TTTCCCGCCG GAACAACAAC CACAAATGAG GTCGCAGTTG
GCTAACTCTA TTGTTTGTAT TTGTAGTCAA AACTTAGTTA AGAAAACAGG TGGGGGTCGT
TGTGCGGCTC ATGAGATTAT GTTGAATACT CCGGCGATCG CTAACTTAAT TCGGGAGTCG
AAAAATTCTC AGCTTTATTC TCAAATTCAA ATGGGCGCTA AGTTAGGAAT GCAAACTATG
GAAATGTCTT TGGCTAAACT TTATGAAAAA GGGAATGTGA CTTGGGCAAA TGCTATGGCT
AAGGCAGTTA AGCCTGATGA ATTAGAGGCT TTGATTGGCC CTGAGCCCAG GGAAACTAAG
GCTAAAACTA AGGCTAAAGC TAGAGCTCAT TAA
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| Protein sequence | MSLMIEDVLE SLVEQGGSDV HIQARAPIFF RINGQLTAQT QFGENMEPMV VQALIFQMLN
NMQRKHLEQN WELDSAYGVK GLARFRLNVY RERGSWAACM RALASKIPNA DKLGIPMILR
EMTERPRGLF LVTGQTGSGK TTTMAALIDL INRTRTEHIL TVEDPIEYVF PNQKSLFHQR
QKGEDTKSFA NALKGALRQD PDIILVGEMR DLETIGLACS AAETGHLVFG TLHTNSAAGT
VDRMLDVFPP EQQPQMRSQL ANSIVCICSQ NLVKKTGGGR CAAHEIMLNT PAIANLIRES
KNSQLYSQIQ MGAKLGMQTM EMSLAKLYEK GNVTWANAMA KAVKPDELEA LIGPEPRETK
AKTKAKARAH
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