Gene Tery_1495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_1495 
Symbol 
ID4243070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp2271384 
End bp2272046 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content37% 
IMG OID638106645 
Producthypothetical protein 
Protein accessionYP_721255 
Protein GI113475194 
COG category[S] Function unknown 
COG ID[COG4627] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0294905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.282523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAA AACAGTTACG CTTAAGTCCT CATAATTATA ACGGCATTAA AAAAGTTCAA 
GTGGGTTGTG GCCCCCATAA TATCATGGAC GACTGGTGGA ATGTGGATAT TCGACCTTTT
CCTGGTATTG ATCAAGTGAT GGATGTGACT AAACCTTGGC CTTTTAATGG TTTGGAATAT
GTGTATGGGG AACATTTTCT CGAACATTTA AGTCTGGAAG GAGCGATCGC TTTCCTGAAT
AATGTTTGGA AAAGCCTGAA ACCTGGTGGA GTAATTCGAC TTTCTACTCC TTCCATAGAA
TGGGTACTTT CTACTCATTT TAACTTGTCA GAAACTAATC CACAAAGACG GATTGATTCT
ACATTTTCGA TGAATCGTGC TTTTCACGGG TGGGGTCATC AATTTATTTA TTCAAAAGAT
TTTTTGCAAT CTTTACTGGA TAATTTAGGA TGGCAAAAAG TTGTATTTTG TGAATATGGA
AAAAGTGAAC ATTCAAGTTT GCAAGGTATC GAACGTCATG GAAATTATCG AGTTGATAAT
GGATATCCTA ATGTTTGGAT TGTAGAAGGT ACACGCGGGG ATGGTCGTTC AGAATCTAGT
GCTTCATCTT ATCAGAAATT ACTAGATAAA TCTTATATAA GTTATGTTAG ATCTGGTCAT
TAA
 
Protein sequence
MSVKQLRLSP HNYNGIKKVQ VGCGPHNIMD DWWNVDIRPF PGIDQVMDVT KPWPFNGLEY 
VYGEHFLEHL SLEGAIAFLN NVWKSLKPGG VIRLSTPSIE WVLSTHFNLS ETNPQRRIDS
TFSMNRAFHG WGHQFIYSKD FLQSLLDNLG WQKVVFCEYG KSEHSSLQGI ERHGNYRVDN
GYPNVWIVEG TRGDGRSESS ASSYQKLLDK SYISYVRSGH