Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tery_0546 |
Symbol | |
ID | 4244514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Trichodesmium erythraeum IMS101 |
Kingdom | Bacteria |
Replicon accession | NC_008312 |
Strand | - |
Start bp | 862472 |
End bp | 865609 |
Gene Length | 3138 bp |
Protein Length | 1045 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638105855 |
Product | DNA polymerase I |
Protein accession | YP_720469 |
Protein GI | 113474408 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAATC ACTCTCCTAT AGCTCTTTTT GTTGATGGTC ATTCTCTCGC CTTTCGTTCC TACTACGCTT TTGCCAAAAG TCGTAATGGA GGCTTGAAAA CTTCTACAGG TATTCCTACA AGTATTTGTT TTGGGTTCCT CAAATCTTTA TTAGAAGTAA TAAATACCCA AAAACCAGAA TATTTAGCGA TCGCCTTTGA TTTAGGAAAA CCTACATTTC GCCACGAAGC TGATAAAAAC TATAAGGCAG ATCGGCCAGA ACCACCAGAA GATTTAATTA TTGACCTAGG AAATTTGCAA GACCTTCTCA AAGCTTTTAA TTTAACAGTT ATTACTGCTC CTGGTTATGA AGCTGATGAT ATATTGGGAA CTTTAGCAAA AAAAGCTAGT GCTACTGGCT TTAAGGTAAA AATTCTTTCG GGAGACCAAG ATTTATTTCA ATTAATAGAT GCAGAAAAAG GTATTAGTGT TTTACATTTA CCTGGGGGCA AAGGTAGTAT TCCTCAAGAA TTTTTTCCTG AAGAAGTTAA GGAAAAATTG GGTATTTTAC CTACTCAAGT TGTTGATTAT AAAGCTCTTT GTGGAGATAA GTCTGACAAT ATTCCTGGTG TTAGAGGGAT TGGACAAAAA ACTGCTGTTA AGTTATTGAA TGAATATGGT TGTCTTTCCG AAATTTATGC TTCTCTGGAA CAAATTAAAG GAGCAAATAA GAAAAAATTA GTATTAGGAA AAACTGAGGC AGAGCATTCT CAATTTATGG CAAAAATTGA AGTAAATGTG CCGTTAAATA TTGACATAGA AGATTGTAAA TTTAAAAAGA TTTATCCCTC AGAAATTGAA CCTATTTTGC AAAAGCTAGA ATTACAACAT TTTATAAATA AAATTCCCCA TTTAGAACAG CAATTTAATA GTTTAGTAGA AGTTAAGTCT GGGCTGGATG AGTCAGGAAT TCAGCAGCAA GAAATATCTC AAAATACTTT GGTTGAAATC GGGAGTGATG ATTGGTTTTT TAGTGCAGAA GATACAAAAG TAGCTAAACA GCAAACTTCA ACAAAATCAA AAATAAAACC TCAAATTGTT GATACTATAG AAAAATTAAA CAAATTAGTA AATATTTTAA AAGAACAGAA AAATCCTCAT ATTCCCGTCG CTTGGGATAC GGAAACAACA TCTTTAGAAC CACGAGATGC AGAGTTAGTT GGAATTGGTT GTTGTTGGGG AAAAAATATG GAAGATGTTG CCTATATTCC TACCGGACAT AAAACTGATA AAAATCTGGA TAAGGTGACA GTATTAGAGA GTTTAAAACC TGTTTTAGAA AGTAGCGAAT ATCCAAAAGT ATTTCAAAAT TCAAAATTTG ATAGATTAGT TTTTCGCTGT CAAGGAATTA AATTAACTGG AGTTTTTTTT GACACAATGT TGGCTAGTTA TGTATTAAAT CCAGAAGCAA AACATAGTCT GGAAGAAATA TATATTAGAT ACCTTAGAAA TGTGGGAATA AATTTACAGA GTTATCAGGA TGTAGTGTCA AAAAATCAAA CTATTGCCGA CCTAGATATT CTCAAAGTAG CTGACTATTG TGGTACTCAG GTTTGGGTGA CATTTCAGTT AGTAGAAAAA TTAAGAACAG AATTAGAAAA AGCCGATAAA AATAAATCTA CCGAGAAATC TTTATATCGA TTATTAGTGG ATGTAGAACA GCCGTTAGAA CCTGTTTTAG CAGAAATGGA ATTTCAGGGA ATTAGGATTG ATATTGAATA TCTAAAAAAG TTCTCAGTCC AACTAAAAGA AGATTTAGAA GAAATTGAAA AAAGAGCTTT TAAAACTGTA GATAGTCAAG TTTTACAAAA ATATCTACAA ACAGAAATTC ATGAGATAGA CTTTAATTCA TTTAGTAATC AACAAGAATT AAAAAAAGCA ATATCTAGCC CCATACTTAA AGCATATATT ACAAAATTAT TAAAAGAGCA TAGACAAAAT CTAGAAAATA TTGAAAGCCA AATCAATCAA GTAGAAACCA GGGATTTATT AAACCTTAAT TCCCCATCTC AATTAAGTGA ACTCTTATTT AGAATACTCA ATCAAAATCA TAAAAAATCT CGCCGAATAA AAACTGGTTA CTCTACAGAT GTAGTAGCCC TAGAAAAATT ACAAACAGAA CCTGAACATC ATCCCATTAT TGATGAAATA TTAAATCATC GAACTTTATA TAAACTTTTT TCTACTTATG TCGAAGCAAT ACCAAGATTA GTTCGTTCCG ATACTCAGCG AGTACATACA AACTTTAATC AAACTCAAAC AGATACAGGG CGTTTATCTT CTTCTGAACC AAACTTACAA AATATTCCTA TTGGCACAAA ATTTTCTCGG CAAATTCGTC AGGCATTTCT ACCAAAAAAA GATTGGTTAT TAGTAGCTGC AGATTATTCC CAAATAGAAT TAAGAATTTT AGCACATTTG AGTCAAGAAC CAGTCTTAAT AGAAGCCTAT AAAAATAATC AAGATGTACA TACAGTTACA GCTAAATTAT TATTTGAAAA AGAGGAAATT TCATCAGAAG AAAGGCGTGT CGGTAAGACT ATAAATTTTG GCGTTATCTA CGGCATGGGA GCACAAAAAT TAGCAAGGTC TGTCAAAATA ACAGTCAAAG AAAGCAAACA ATTTTTAGAA AAATATAAAC AACAATATTC CCTAGTTTTT GCATATTTAG AAAAGTTGAA AAAACAAGCG ATCGCTAAAG GTTATGTAGA AACAATATTG GGTCGGCGAC GTTATTTTGA ATTAGAATCT AAAACTATCC GTGATTTAAA GGACAAAGAA CCAGAGGAAA TTAATTTACA GGAATTAAAA TTCAGTCAAA ATGATGCTCA AATTTTAAGA TCAGCAGCTA ACTCACCAAT TCAAGGTTCA AGTGCAGATA TTATTAAAAT AGCTATGATT AGACTGAACA AAATATTGAC AAATTATCAG ACAAAACTGT TATTGCAAGT GCATGATGAA TTAGTATTTG AAGTTCCACC ATCAGAGTTA GAAAAAATGC AACAACTTAT TAAATCTACA ATGGAAAATG CTGTTACTTT AAAAGTACCT CTAATAGTAG ATATTCATGG AGGTAAAAAT TGGATGGAGA CTAAATAG
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Protein sequence | MVNHSPIALF VDGHSLAFRS YYAFAKSRNG GLKTSTGIPT SICFGFLKSL LEVINTQKPE YLAIAFDLGK PTFRHEADKN YKADRPEPPE DLIIDLGNLQ DLLKAFNLTV ITAPGYEADD ILGTLAKKAS ATGFKVKILS GDQDLFQLID AEKGISVLHL PGGKGSIPQE FFPEEVKEKL GILPTQVVDY KALCGDKSDN IPGVRGIGQK TAVKLLNEYG CLSEIYASLE QIKGANKKKL VLGKTEAEHS QFMAKIEVNV PLNIDIEDCK FKKIYPSEIE PILQKLELQH FINKIPHLEQ QFNSLVEVKS GLDESGIQQQ EISQNTLVEI GSDDWFFSAE DTKVAKQQTS TKSKIKPQIV DTIEKLNKLV NILKEQKNPH IPVAWDTETT SLEPRDAELV GIGCCWGKNM EDVAYIPTGH KTDKNLDKVT VLESLKPVLE SSEYPKVFQN SKFDRLVFRC QGIKLTGVFF DTMLASYVLN PEAKHSLEEI YIRYLRNVGI NLQSYQDVVS KNQTIADLDI LKVADYCGTQ VWVTFQLVEK LRTELEKADK NKSTEKSLYR LLVDVEQPLE PVLAEMEFQG IRIDIEYLKK FSVQLKEDLE EIEKRAFKTV DSQVLQKYLQ TEIHEIDFNS FSNQQELKKA ISSPILKAYI TKLLKEHRQN LENIESQINQ VETRDLLNLN SPSQLSELLF RILNQNHKKS RRIKTGYSTD VVALEKLQTE PEHHPIIDEI LNHRTLYKLF STYVEAIPRL VRSDTQRVHT NFNQTQTDTG RLSSSEPNLQ NIPIGTKFSR QIRQAFLPKK DWLLVAADYS QIELRILAHL SQEPVLIEAY KNNQDVHTVT AKLLFEKEEI SSEERRVGKT INFGVIYGMG AQKLARSVKI TVKESKQFLE KYKQQYSLVF AYLEKLKKQA IAKGYVETIL GRRRYFELES KTIRDLKDKE PEEINLQELK FSQNDAQILR SAANSPIQGS SADIIKIAMI RLNKILTNYQ TKLLLQVHDE LVFEVPPSEL EKMQQLIKST MENAVTLKVP LIVDIHGGKN WMETK
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